Gene: Nitab4.5_0002093g0040

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0002093g0040
  • Transcript Identifier Nitab4.5_0002093g0040.1
  • Gene Type Coding gene
  • Location Nitab4.5_0002093 : 3895-6451 : negative

Gene Family Information

  • ID HOM05D000563
  • #Genes/#Species 981/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0002093g0040.1
  • SR1-identifier Nta12g00680.1

Descriptions

  • Description Like-Sm (LSM) domain, U6 snRNA-associated Sm-like protein LSm2, Ribonucleoprotein LSM domain, eukaryotic/archaea-type, Ribonucleoprotein LSM domain
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
InterPromRNA processing
GO:0016567
ISO
PLAZA Homology (enrichment)protein ubiquitination HOM05D000563

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D000563

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016654 U6 snRNA-associated Sm-like protein LSm2
IPR001163 LSM domain, eukaryotic/archaea-type
IPR010920 LSM domain superfamily
Mapman id Description
16.2.3.2 RNA processing.pre-mRNA splicing.U6-associated LSm accessory ribonucleoprotein complex.component LSm2