Gene: Nitab4.5_0006874g0030
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0006874g0030
- Transcript Identifier Nitab4.5_0006874g0030.1
- Gene Type Coding gene
- Location Nitab4.5_0006874 : 97544-100094 : negative
Gene Family Information
- ID HOM05D000563
- #Genes/#Species 981/100
- Phylogenetic origin
- ID ORTHO05D006573
- #Genes/#Species 141/85
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Nitab4.5_0006874g0030.1
- SR1-identifier Nta12g27220.1
Descriptions
- Description U6 snRNA-associated Sm-like protein LSm2, Ribonucleoprotein LSM domain, Like-Sm (LSM) domain, Ribonucleoprotein LSM domain, eukaryotic/archaea-type
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006397 | IEA | InterPro | mRNA processing | |
| GO:0016567 | ISO | PLAZA Homology (enrichment) | protein ubiquitination | HOM05D000563 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G03330 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G03330 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.2.3.2 | RNA processing.pre-mRNA splicing.U6-associated LSm accessory ribonucleoprotein complex.component LSm2 |