Gene: SGA_v2.0_scaffold11G05791

General Information

Structural Information

Species Striga asiatica
Gene Identifier SGA_v2.0_scaffold11G05791
Transcript Identifier SGA_v2.0_scaffold11T05791
Gene Type Coding gene
Location scaffold11 : 2536148-2551598 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000563
#Genes/#Species 981/100
Phylogenetic origin

ID ORTHO05D000536
#Genes/#Species 803/100
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

Descriptions

Short descriptions
Ortholog descriptions

product Elongation factor Tu

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006397	IEA	InterPro	mRNA processing
GO:0006414	IEA	InterPro	translational elongation
GO:0071472	ISO	PLAZA Integrative Orthology	cellular response to salt stress	AT5G19000
GO:0006970	ISO	PLAZA Integrative Orthology	response to osmotic stress	AT5G19000
GO:0042631	ISO	PLAZA Integrative Orthology	cellular response to water deprivation	AT5G19000
GO:0016567	ISO	PLAZA Homology (enrichment)	protein ubiquitination	HOM05D000563

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0003924	IEA	InterPro	GTPase activity
GO:0005525	IEA	InterPro	GTP binding
GO:0003746	IEA	InterPro	translation elongation factor activity
GO:0042802	ISO	PLAZA Integrative Orthology	identical protein binding	AT5G19000

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT5G19000

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR002083	MATH/TRAF domain
IPR004160	Translation elongation factor EFTu/EF1A, C-terminal
IPR009001	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR026960	Reverse transcriptase zinc-binding domain
IPR001163	LSM domain, eukaryotic/archaea-type
IPR041709	Elongation factor Tu (EF-Tu), GTP-binding domain
IPR008974	TRAF-like
IPR034090	BPM, C-terminal
IPR016654	U6 snRNA-associated Sm-like protein LSm2
IPR011333	SKP1/BTB/POZ domain superfamily
IPR000795	Translational (tr)-type GTP-binding domain
IPR000210	BTB/POZ domain
IPR010920	LSM domain superfamily
IPR009000	Translation protein, beta-barrel domain superfamily
IPR033720	Elongation factor Tu, domain 2
IPR004161	Translation elongation factor EFTu-like, domain 2
IPR004541	Translation elongation factor EFTu/EF1A, bacterial/organelle

Mapman id	Description
16.2.3.2	RNA processing.pre-mRNA splicing.U6-associated LSm accessory ribonucleoprotein complex.component LSm2
17.7.4.1	Protein biosynthesis.organelle machinery.translation elongation.elongation factor (EF-Tu)
19.2.2.8.2.2.6	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ubiquitin ligase complexes.BTB/POZ substrate adaptor activities.substrate adaptor (BPM)