Gene: Ah.11g049240

General Information

Structural Information

Species Amaranthus hybridus
Gene Identifier Ah.11g049240
Transcript Identifier Ah.11g049240-v1.1.a1
Gene Type Coding gene
Location AmaHy_arrow1_Scaffold_11 : 19608650-19611349 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000563
#Genes/#Species 981/100
Phylogenetic origin

ID ORTHO05D006573
#Genes/#Species 141/85
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid Ah.11g049240-v1.1.a1

Descriptions

Short descriptions
Ortholog descriptions

Description Sm-like protein LSM2 (AtLSM2) (U6 snRNA-associated Sm-like protein LSM2)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006397	IEA	InterPro	mRNA processing
GO:0009772	IEA	InterPro	photosynthetic electron transport in photosystem II
GO:0019684	IEA	InterPro	photosynthesis, light reaction
GO:0016567	ISO	PLAZA Homology (enrichment)	protein ubiquitination	HOM05D000563

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0045156	IEA	InterPro	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
GO:0005515	ISO	PLAZA Homology (enrichment)	protein binding	HOM05D000563

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR016654	U6 snRNA-associated Sm-like protein LSm2
IPR001163	LSM domain, eukaryotic/archaea-type
IPR010920	LSM domain superfamily
IPR000484	Photosynthetic reaction centre, L/M
IPR036854	Photosystem II protein D1/D2 superfamily

Mapman id	Description
16.2.3.2	RNA processing.pre-mRNA splicing.U6-associated LSm accessory ribonucleoprotein complex.component LSm2