Gene: TPR.G37604

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G37604
  • Transcript Identifier TPR.T38862
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_LG5 : 8240981-8245862 : positive

Gene Family Information

  • ID HOM05D000563
  • #Genes/#Species 981/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA38862.v2
  • id Tp57577_TGAC_v2_gene37604.v2
  • pacid 35983964

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
InterPromRNA processing
GO:0016567
ISO
PLAZA Homology (enrichment)protein ubiquitination HOM05D000563

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G03330

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G03330

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016654 U6 snRNA-associated Sm-like protein LSm2
IPR010920 LSM domain superfamily
IPR001163 LSM domain, eukaryotic/archaea-type
IPR011333 SKP1/BTB/POZ domain superfamily
Mapman id Description
16.2.3.2 RNA processing.pre-mRNA splicing.U6-associated LSm accessory ribonucleoprotein complex.component LSm2