Gene: Sopen09g028780
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen09g028780
- Transcript Identifier Sopen09g028780.1
- Gene Type Coding gene
- Location Spenn-ch09 : 77005093-77008616 : negative
Gene Family Information
- ID HOM05D000563
- #Genes/#Species 981/100
- Phylogenetic origin
- ID ORTHO05D006573
- #Genes/#Species 141/85
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen09g028780.1
Descriptions
- Description Small nuclear ribonucleoprotein family protein | CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain , U6 snRNA-associated Sm-like protein LSm2 , Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type , Like-Sm ribonucleoprotein (LSM)-related domain
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006397 | IEA | InterPro | mRNA processing | |
| GO:0016567 | ISO | PLAZA Homology (enrichment) | protein ubiquitination | HOM05D000563 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D000563 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.2.3.2 | RNA processing.pre-mRNA splicing.U6-associated LSm accessory ribonucleoprotein complex.component LSm2 |