Gene: Thhalv10009199m.g

General Information

Structural Information

  • Species Eutrema salsugineum
  • Gene Identifier Thhalv10009199m.g
  • Transcript Identifier Thhalv10009199m
  • Gene Type Coding gene
  • Location scaffold_5 : 14811052-14812109 : positive

Gene Family Information

  • ID HOM05D000563
  • #Genes/#Species 981/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thhalv10009199m.g.v1.0
  • pacid 20187669

Descriptions

  • Description K12621 - U6 snRNA-associated Sm-like protein LSm2 (LSM2)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
InterPromRNA processing
GO:0016567
ISO
PLAZA Homology (enrichment)protein ubiquitination HOM05D000563

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G03330

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G03330

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010920 LSM domain superfamily
IPR016654 U6 snRNA-associated Sm-like protein LSm2
IPR001163 LSM domain, eukaryotic/archaea-type
Mapman id Description
16.2.3.2 RNA processing.pre-mRNA splicing.U6-associated LSm accessory ribonucleoprotein complex.component LSm2