Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0015042g0010 Nicotiana tabacum HOM05D005147 ORTHO05D006132 4.0e-105 384.8 198 100.0
Nitab4.5_0000798g0160 Nicotiana tabacum HOM05D005147 ORTHO05D006132 7.6e-72 274.2 248 63.7
Nitab4.5_0001003g0200 Nicotiana tabacum HOM05D005147 ORTHO05D006132 4.3e-59 231.9 244 53.7
Nitab4.5_0003928g0030 Nicotiana tabacum HOM05D005147 ORTHO05D006132 1.3e-58 230.3 244 53.3
Peaxi162Scf00254g00618 Petunia axillaris HOM05D005147 ORTHO05D006132 1.3e-58 230.3 243 53.5
Solyc11g008700.2 Solanum lycopersicum HOM05D005147 ORTHO05D006132 3.7e-58 228.8 244 52.9
Sopen11g004480 Solanum pennellii HOM05D005147 ORTHO05D006132 4.8e-58 228.4 244 52.9
EL10Ac4g10030 Beta vulgaris HOM05D005147 ORTHO05D006132 1.0e-52 210.7 206 54.4
MSTRG.27416 Avicennia marina HOM05D005147 ORTHO05D006132 9.7e-51 204.1 242 47.9
CSS0016526 Camellia sinensis var. sinensis HOM05D005147 ORTHO05D006132 1.6e-50 203.4 237 49.4
Dinv17137 Davidia involucrata HOM05D005147 ORTHO05D006132 2.8e-50 202.6 242 46.7
arahy.Tifrunner.gnm1.ann1.9U7TDI Arachis hypogaea HOM05D005147 ORTHO05D006132 3.7e-50 202.2 241 46.5
arahy.Tifrunner.gnm1.ann1.IZJM3F Arachis hypogaea HOM05D005147 ORTHO05D006132 4.8e-50 201.8 241 46.9
Cc09_g04140 Coffea canephora HOM05D005147 ORTHO05D006132 1.1e-49 200.7 241 47.3
Thecc.07G106800 Theobroma cacao HOM05D005147 ORTHO05D006132 1.4e-49 200.3 242 47.5
Gorai.003G087900 Gossypium raimondii HOM05D005147 ORTHO05D006132 1.8e-49 199.9 242 47.1
Glyma.20G218800 Glycine max HOM05D005147 ORTHO05D006132 3.1e-49 199.1 241 48.1
Gohir.A02G107106 Gossypium hirsutum HOM05D005147 ORTHO05D006132 4.1e-49 198.7 242 47.1
Lsat_1_v5_gn_1_127920 Lactuca sativa HOM05D005147 ORTHO05D006132 5.3e-49 198.4 242 46.3
Oeu040505.2 Olea europaea HOM05D005147 ORTHO05D006132 6.9e-49 198.0 266 44.0
Lj5g0011670 Lotus japonicus HOM05D005147 ORTHO05D006132 9.0e-49 197.6 241 48.1
Ah.06g195220 Amaranthus hybridus HOM05D005147 ORTHO05D006132 1.2e-48 197.2 141 66.0
Gohir.D03G072200 Gossypium hirsutum HOM05D005147 ORTHO05D006132 1.2e-48 197.2 242 46.7
Duzib128G1295 Durio zibethinus HOM05D005147 ORTHO05D006132 1.5e-48 196.8 242 46.3
Prupe.6G365400 Prunus persica HOM05D005147 ORTHO05D006132 1.5e-48 196.8 242 45.9
DCAR_023252 Daucus carota HOM05D005147 ORTHO05D006132 2.6e-48 196.1 242 45.5
Manes.13G000300 Manihot esculenta HOM05D005147 ORTHO05D006132 2.6e-48 196.1 242 45.9
RcHm_v2.0_Chr3g0447391 Rosa chinensis HOM05D005147 ORTHO05D006132 2.6e-48 196.1 241 44.8
Hund07384 Selenicereus undatus HOM05D005147 ORTHO05D006132 2.6e-48 196.1 242 46.3
Ca_09963_v3 Cicer arietinum L. HOM05D005147 ORTHO05D006132 3.4e-48 195.7 241 46.9
HanXRQChr16g0511771 Helianthus annuus HOM05D005147 ORTHO05D006132 3.4e-48 195.7 242 46.3
TAR362G0740 Trochodendron aralioides HOM05D005147 ORTHO05D006132 4.5e-48 195.3 242 46.3
Glyma.10G171500 Glycine max HOM05D005147 ORTHO05D006132 5.9e-48 194.9 241 47.3
FAN02G4331 Fragaria x ananassa HOM05D005147 ORTHO05D006132 7.7e-48 194.5 241 44.8
Nn3g19309 Nelumbo nucifera HOM05D005147 ORTHO05D006132 7.7e-48 194.5 241 46.5
QL10p016598 Quercus lobata HOM05D005147 ORTHO05D006132 7.7e-48 194.5 242 45.9
THA.LOC104820936 Tarenaya hassleriana HOM05D005147 ORTHO05D006132 7.7e-48 194.5 242 44.6
Eucgr.B01442 Eucalyptus grandis HOM05D005147 ORTHO05D006132 1.0e-47 194.1 157 60.5
VMungo0720G1244 Vigna mungo HOM05D005147 ORTHO05D006132 1.3e-47 193.7 241 46.5
CiPaw.08G111700 Carya illinoinensis HOM05D005147 ORTHO05D006132 2.2e-47 193.0 242 45.9
FAN09G3357 Fragaria x ananassa HOM05D005147 ORTHO05D006132 2.9e-47 192.6 241 44.4
TWI36G1457 Tripterygium wilfordii HOM05D005147 ORTHO05D006132 3.8e-47 192.2 242 45.0
FvH4_6g00060 Fragaria vesca HOM05D005147 ORTHO05D006132 1.1e-46 190.7 168 57.1
Phvul.007G117900 Phaseolus vulgaris HOM05D005147 ORTHO05D006132 1.1e-46 190.7 241 45.6
Actinidia19646 Actinidia chinensis HOM05D005147 ORTHO05D006132 1.9e-46 189.9 242 45.5
Cpa.g.sc88.4 Carica papaya HOM05D005147 ORTHO05D006132 3.2e-46 189.1 157 59.9
MELO3C008955.2 Cucumis melo HOM05D005147 ORTHO05D006132 4.2e-46 188.7 242 44.2
CsaV3_4G030880 Cucumis sativus L. HOM05D005147 ORTHO05D006132 4.2e-46 188.7 242 44.2
AUR62006615 Chenopodium quinoa HOM05D005147 ORTHO05D006132 5.5e-46 188.3 143 64.3
Potri.010G179000 Populus trichocarpa HOM05D005147 ORTHO05D006132 5.5e-46 188.3 242 44.2
GSVIVG01003992001 Vitis vinifera HOM05D005147 ORTHO05D006132 5.5e-46 188.3 244 45.1
Aa31LG11G13360 Aethionema arabicum HOM05D005147 ORTHO05D006132 7.2e-46 188.0 165 57.6
Atru.chr2.212 Acer truncatum HOM05D005147 ORTHO05D006132 1.6e-45 186.8 242 43.8
AT5G16260 Arabidopsis thaliana HOM05D005147 ORTHO05D006132 2.1e-45 186.4 156 58.3
Cfa006223 Carpinus fangiana HOM05D005147 ORTHO05D006132 2.1e-45 186.4 242 44.6
MD12G1261400 Malus domestica HOM05D005147 ORTHO05D006132 2.1e-45 186.4 242 44.6
Sc16g0010670 Simmondsia chinensis HOM05D005147 ORTHO05D006132 2.1e-45 186.4 242 44.2
Ciclev10000750m.g Citrus clementina HOM05D005147 ORTHO05D006132 2.7e-45 186.0 141 63.8
Aqoxy3G00601 Aquilegia oxysepala HOM05D005147 ORTHO05D006132 3.6e-45 185.7 242 44.6
AL6G27150 Arabidopsis lyrata HOM05D005147 ORTHO05D006132 3.6e-45 185.7 156 59.0
ECA232G4784 Erigeron canadensis HOM05D005147 ORTHO05D006132 3.6e-45 185.7 143 62.9
PGR119G0204 Punica granatum HOM05D005147 ORTHO05D006132 3.6e-45 185.7 242 44.6
Potri.008G078200 Populus trichocarpa HOM05D005147 ORTHO05D006132 4.6e-45 185.3 242 43.0
ATR0743G159 Amborella trichopoda HOM05D005147 ORTHO05D006132 6.1e-45 184.9 242 43.4
CANSAT64G0126 Cannabis sativa HOM05D005147 ORTHO05D006132 6.1e-45 184.9 242 45.9
AUR62000267 Chenopodium quinoa HOM05D005147 ORTHO05D006132 6.1e-45 184.9 246 43.9
Medtr1g078210 Medicago truncatula HOM05D005147 ORTHO05D006132 6.1e-45 184.9 243 44.0
Carub.0006s1445 Capsella rubella HOM05D005147 ORTHO05D006132 1.0e-44 184.1 156 58.3
Sed0015307 Sechium edule HOM05D005147 ORTHO05D006132 1.0e-44 184.1 242 44.6
MD00G1017100 Malus domestica HOM05D005147 ORTHO05D006132 1.4e-44 183.7 246 44.3
Sabra08G0058100 Salix brachista HOM05D005147 ORTHO05D006132 1.4e-44 183.7 249 42.2
Lalb_Chr02g0149501 Lupinus albus HOM05D005147 ORTHO05D006132 1.8e-44 183.3 241 43.6
CARHR197050 Cardamine hirsuta HOM05D005147 ORTHO05D006132 2.3e-44 183.0 156 58.3
SHI13696 Sapria himalayana HOM05D005147 ORTHO05D006132 2.3e-44 183.0 141 63.8
FAN06G0198 Fragaria x ananassa HOM05D005147 ORTHO05D006132 3.0e-44 182.6 139 64.7
A10p22800 Brassica napus HOM05D001331 ORTHO05D006132 3.9e-44 182.2 156 57.7
FvH4_7g28070 Fragaria vesca HOM05D005147 ORTHO05D001533 3.9e-44 182.2 168 56.5
FAN06G0735 Fragaria x ananassa HOM05D005147 ORTHO05D006132 3.9e-44 182.2 168 56.5
Lj8A197T41 Lonicera japonica HOM05D005147 ORTHO05D006132 3.9e-44 182.2 287 40.4
BcaC04g18905 Brassica carinata HOM05D005147 ORTHO05D006132 5.1e-44 181.8 156 57.1
BolC9t58914H Brassica oleracea HOM05D005147 ORTHO05D006132 5.1e-44 181.8 156 57.1
BraA10t44347Z Brassica rapa HOM05D005147 ORTHO05D006132 5.1e-44 181.8 156 57.1
BcaB08g36860 Brassica carinata HOM05D005147 ORTHO05D006132 6.7e-44 181.4 156 57.1
Thhalv10013396m.g Eutrema salsugineum HOM05D005147 ORTHO05D006132 8.8e-44 181.0 241 42.7
Lalb_Chr06g0168531 Lupinus albus HOM05D005147 ORTHO05D006132 8.8e-44 181.0 241 44.0
Zm00001eb196230 Zea mays HOM05D005147 ORTHO05D006132 2.5e-43 179.5 244 42.2
Sp6g27900 Schrenkiella parvula HOM05D005147 ORTHO05D006132 3.3e-43 179.1 156 57.1
PSO675G5070 Papaver somniferum HOM05D005147 ORTHO05D006132 5.7e-43 178.3 141 59.6
Zm00001eb093390 Zea mays HOM05D005147 ORTHO05D006132 9.7e-43 177.6 168 53.6
TPR.G10532 Trifolium pratense HOM05D005147 ORTHO05D006132 1.1e-41 174.1 246 43.5
unitig_747.g21462 Utricularia gibba HOM05D005147 ORTHO05D006132 2.4e-41 172.9 230 45.7
Zm00001eb321590 Zea mays HOM05D005147 ORTHO05D006132 4.1e-41 172.2 168 53.0
Os04g0496400 Oryza sativa ssp. japonica HOM05D005147 ORTHO05D006132 9.1e-41 171.0 244 40.6
PSO017G2923 Papaver somniferum HOM05D005147 ORTHO05D006132 9.1e-41 171.0 141 58.2
FAN10G0474 Fragaria x ananassa HOM05D005147 ORTHO05D001533 6.1e-37 158.3 169 52.1
SGA_v2.0_scaffold62G21485 Striga asiatica HOM05D005147 ORTHO05D006132 1.0e-36 157.5 239 42.3
Actinidia05852 Actinidia chinensis HOM05D005147 ORTHO05D006132 3.9e-36 155.6 203 46.3
Mapoly0021s0138 Marchantia polymorpha HOM05D005147 ORTHO05D006132 5.1e-36 155.2 157 49.7
Zm00001eb092200 Zea mays HOM05D005147 ORTHO05D006132 3.3e-35 152.5 141 54.6
SMO364G0719 Selaginella moellendorffii HOM05D005147 ORTHO05D006132 7.4e-35 151.4 143 54.5
Rhsim05G0163700 Rhododendron simsii HOM05D005147 ORTHO05D006132 1.7e-34 150.2 138 56.5
Psat6g051880 Pisum sativum HOM05D005147 ORTHO05D006132 1.8e-33 146.7 120 60.0
CDE09G1177 Ceratophyllum demersum HOM05D005147 ORTHO05D006132 4.1e-33 145.6 119 60.5
ClCG04G001690 Citrullus lanatus HOM05D005147 ORTHO05D006132 7.0e-33 144.8 204 41.7
CBR_g50472 Chara braunii HOM05D005147 ORTHO05D006132 1.2e-32 144.1 169 46.2
Pp3c20_9510 Physcomitrium patens HOM05D005147 ORTHO05D006132 2.0e-32 143.3 157 48.4
Actinidia40010 Actinidia chinensis HOM05D005147 ORTHO05D006132 2.5e-30 136.3 144 55.6
Zm00001eb058540 Zea mays HOM05D005147 ORTHO05D006132 7.2e-30 134.8 168 45.2
Sabra10G0137300 Salix brachista HOM05D005147 ORTHO05D006132 1.2e-29 134.0 155 48.4
SEGI_04471 Sequoiadendron giganteum HOM05D005147 ORTHO05D006132 2.1e-29 133.3 115 60.9
vmacro07057 Vaccinium macrocarpon HOM05D005147 ORTHO05D006132 2.1e-29 133.3 292 32.9
Cre17.g707050 Chlamydomonas reinhardtii HOM05D005147 ORTHO05D006132 6.1e-29 131.7 157 46.5
GSVIVG01007182001 Vitis vinifera HOM05D005147 ORTHO05D006132 2.2e-26 123.2 241 35.7
MCO16G453 Micromonas commoda HOM05D005147 ORTHO05D006132 2.4e-25 119.8 170 42.4
CBR_g19604 Chara braunii HOM05D005147 ORTHO05D006132 7.7e-24 114.8 170 38.2
AagrBONN_evm.TU.Sc2ySwM_368.1306 Anthoceros agrestis HOM05D005147 ORTHO05D006132 1.5e-22 110.5 210 36.7
Cc06_g17710 Coffea canephora HOM05D005147 ORTHO05D006132 9.4e-22 107.8 146 44.5
HPP92_011449 Vanilla planifolia HOM05D005147 ORTHO05D006132 2.8e-18 96.3 101 53.5
PRCOL_00001696 Prasinoderma coloniale HOM05D005147 ORTHO05D006132 3.0e-12 76.3 191 30.9
Cfa026444 Carpinus fangiana HOM05D005147 ORTHO05D006132 1.3e-10 70.9 170 30.6
Haze_04615 Corylus avellana HOM05D005147 ORTHO05D006132 1.7e-07 60.5 47 59.6


User provided reference genes

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