Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G1177 Ceratophyllum demersum HOM05D005147 ORTHO05D006132 1.3e-218 762.7 378 100.0
TAR362G0740 Trochodendron aralioides HOM05D005147 ORTHO05D006132 3.6e-131 472.2 367 65.9
Cfa006223 Carpinus fangiana HOM05D005147 ORTHO05D006132 5.6e-124 448.4 389 61.2
Nn3g19309 Nelumbo nucifera HOM05D005147 ORTHO05D006132 3.1e-122 442.6 367 62.4
ATR0743G159 Amborella trichopoda HOM05D005147 ORTHO05D006132 2.7e-118 429.5 375 61.1
Aqoxy3G00601 Aquilegia oxysepala HOM05D005147 ORTHO05D006132 4.6e-118 428.7 371 60.9
PSO675G5070 Papaver somniferum HOM05D005147 ORTHO05D006132 1.3e-117 427.2 371 61.2
PSO017G2923 Papaver somniferum HOM05D005147 ORTHO05D006132 8.7e-117 424.5 360 61.1
Glyma.10G171500 Glycine max HOM05D005147 ORTHO05D006132 1.9e-116 423.3 377 56.5
Actinidia19646 Actinidia chinensis HOM05D005147 ORTHO05D006132 1.3e-115 420.6 356 62.9
CiPaw.08G111700 Carya illinoinensis HOM05D005147 ORTHO05D006132 1.3e-115 420.6 389 56.8
TWI36G1457 Tripterygium wilfordii HOM05D005147 ORTHO05D006132 1.6e-115 420.2 394 56.3
Gohir.A02G107106 Gossypium hirsutum HOM05D005147 ORTHO05D006132 4.8e-115 418.7 395 56.5
Gohir.D03G072200 Gossypium hirsutum HOM05D005147 ORTHO05D006132 6.2e-115 418.3 394 56.9
Phvul.007G117900 Phaseolus vulgaris HOM05D005147 ORTHO05D006132 8.1e-115 417.9 374 56.7
VMungo0720G1244 Vigna mungo HOM05D005147 ORTHO05D006132 1.1e-114 417.5 375 57.9
QL10p016598 Quercus lobata HOM05D005147 ORTHO05D006132 3.1e-114 416.0 373 60.3
Ah.06g195220 Amaranthus hybridus HOM05D005147 ORTHO05D006132 6.9e-114 414.8 358 58.4
CSS0016526 Camellia sinensis var. sinensis HOM05D005147 ORTHO05D006132 6.9e-114 414.8 356 61.0
Gorai.003G087900 Gossypium raimondii HOM05D005147 ORTHO05D006132 9.0e-114 414.5 394 56.6
Duzib128G1295 Durio zibethinus HOM05D005147 ORTHO05D006132 1.2e-113 414.1 391 56.8
Lj5g0011670 Lotus japonicus HOM05D005147 ORTHO05D006132 3.4e-113 412.5 367 56.4
Os04g0496400 Oryza sativa ssp. japonica HOM05D005147 ORTHO05D006132 7.6e-113 411.4 361 60.1
Potri.010G179000 Populus trichocarpa HOM05D005147 ORTHO05D006132 4.9e-112 408.7 403 55.3
MELO3C008955.2 Cucumis melo HOM05D005147 ORTHO05D006132 6.4e-112 408.3 389 56.8
arahy.Tifrunner.gnm1.ann1.IZJM3F Arachis hypogaea HOM05D005147 ORTHO05D006132 2.4e-111 406.4 366 57.9
arahy.Tifrunner.gnm1.ann1.9U7TDI Arachis hypogaea HOM05D005147 ORTHO05D006132 4.2e-111 405.6 366 58.2
CsaV3_4G030880 Cucumis sativus L. HOM05D005147 ORTHO05D006132 3.5e-110 402.5 374 57.5
Sc16g0010670 Simmondsia chinensis HOM05D005147 ORTHO05D006132 3.5e-110 402.5 365 58.4
CANSAT64G0126 Cannabis sativa HOM05D005147 ORTHO05D006132 1.0e-109 401.0 366 57.4
MD12G1261400 Malus domestica HOM05D005147 ORTHO05D006132 1.3e-109 400.6 373 57.4
Eucgr.B01442 Eucalyptus grandis HOM05D005147 ORTHO05D006132 2.3e-109 399.8 366 56.6
ECA232G4784 Erigeron canadensis HOM05D005147 ORTHO05D006132 3.0e-109 399.4 371 59.3
Hund07384 Selenicereus undatus HOM05D005147 ORTHO05D006132 6.7e-109 398.3 357 58.0
Prupe.6G365400 Prunus persica HOM05D005147 ORTHO05D006132 1.5e-108 397.1 380 54.7
RcHm_v2.0_Chr3g0447391 Rosa chinensis HOM05D005147 ORTHO05D006132 1.5e-108 397.1 376 54.8
Lalb_Chr06g0168531 Lupinus albus HOM05D005147 ORTHO05D006132 1.6e-107 393.7 369 56.1
MD00G1017100 Malus domestica HOM05D005147 ORTHO05D006132 1.6e-107 393.7 373 56.6
Ciclev10000750m.g Citrus clementina HOM05D005147 ORTHO05D006132 2.8e-107 392.9 396 54.8
Rhsim05G0163700 Rhododendron simsii HOM05D005147 ORTHO05D006132 2.8e-107 392.9 357 59.7
Zm00001eb196230 Zea mays HOM05D005147 ORTHO05D006132 2.8e-107 392.9 359 58.2
HanXRQChr16g0511771 Helianthus annuus HOM05D005147 ORTHO05D006132 3.7e-107 392.5 369 57.5
Zm00001eb093390 Zea mays HOM05D005147 ORTHO05D006132 3.7e-107 392.5 367 56.4
Psat6g051880 Pisum sativum HOM05D005147 ORTHO05D006132 4.8e-107 392.1 371 55.0
THA.LOC104820936 Tarenaya hassleriana HOM05D005147 ORTHO05D006132 4.8e-107 392.1 386 54.7
Lalb_Chr02g0149501 Lupinus albus HOM05D005147 ORTHO05D006132 8.1e-107 391.3 369 56.1
Cc09_g04140 Coffea canephora HOM05D005147 ORTHO05D006132 1.1e-106 391.0 357 57.4
FAN09G3357 Fragaria x ananassa HOM05D005147 ORTHO05D006132 3.1e-106 389.4 379 55.1
Atru.chr2.212 Acer truncatum HOM05D005147 ORTHO05D006132 4.0e-106 389.0 396 53.5
FvH4_6g00060 Fragaria vesca HOM05D005147 ORTHO05D006132 4.0e-106 389.0 370 56.2
Dinv17137 Davidia involucrata HOM05D005147 ORTHO05D006132 5.3e-106 388.7 332 61.1
Aa31LG11G13360 Aethionema arabicum HOM05D005147 ORTHO05D006132 6.9e-106 388.3 375 54.7
AUR62000267 Chenopodium quinoa HOM05D005147 ORTHO05D006132 1.2e-105 387.5 383 53.8
PGR119G0204 Punica granatum HOM05D005147 ORTHO05D006132 1.2e-105 387.5 362 57.7
FAN02G4331 Fragaria x ananassa HOM05D005147 ORTHO05D006132 1.5e-105 387.1 369 56.1
DCAR_023252 Daucus carota HOM05D005147 ORTHO05D006132 2.6e-105 386.3 357 58.8
EL10Ac4g10030 Beta vulgaris HOM05D005147 ORTHO05D006132 7.6e-105 384.8 383 53.5
Ca_09963_v3 Cicer arietinum L. HOM05D005147 ORTHO05D006132 7.6e-105 384.8 432 49.3
Manes.13G000300 Manihot esculenta HOM05D005147 ORTHO05D006132 7.6e-105 384.8 409 52.6
Sp6g27900 Schrenkiella parvula HOM05D005147 ORTHO05D006132 1.7e-104 383.6 393 53.9
MSTRG.27416 Avicennia marina HOM05D005147 ORTHO05D006132 3.8e-104 382.5 359 56.0
Solyc11g008700.2 Solanum lycopersicum HOM05D005147 ORTHO05D006132 3.8e-104 382.5 372 55.9
Carub.0006s1445 Capsella rubella HOM05D005147 ORTHO05D006132 1.4e-103 380.6 394 52.0
vmacro07057 Vaccinium macrocarpon HOM05D005147 ORTHO05D006132 4.2e-103 379.0 462 49.1
AL6G27150 Arabidopsis lyrata HOM05D005147 ORTHO05D006132 7.1e-103 378.3 388 52.6
AT5G16260 Arabidopsis thaliana HOM05D005147 ORTHO05D006132 2.7e-102 376.3 388 52.1
Sabra08G0058100 Salix brachista HOM05D005147 ORTHO05D006132 6.0e-102 375.2 474 46.4
BcaB08g36860 Brassica carinata HOM05D005147 ORTHO05D006132 2.3e-101 373.2 382 53.9
Sopen11g004480 Solanum pennellii HOM05D005147 ORTHO05D006132 3.0e-101 372.9 370 55.9
Sed0015307 Sechium edule HOM05D005147 ORTHO05D006132 5.1e-101 372.1 379 53.3
Nitab4.5_0001003g0200 Nicotiana tabacum HOM05D005147 ORTHO05D006132 3.3e-100 369.4 368 54.1
Peaxi162Scf00254g00618 Petunia axillaris HOM05D005147 ORTHO05D006132 4.3e-100 369.0 367 54.2
Lj8A197T41 Lonicera japonica HOM05D005147 ORTHO05D006132 7.4e-100 368.2 402 54.5
FAN06G0198 Fragaria x ananassa HOM05D005147 ORTHO05D006132 9.6e-100 367.9 382 52.9
BcaC04g18905 Brassica carinata HOM05D005147 ORTHO05D006132 2.8e-99 366.3 386 51.3
BolC9t58914H Brassica oleracea HOM05D005147 ORTHO05D006132 2.8e-99 366.3 386 51.3
unitig_747.g21462 Utricularia gibba HOM05D005147 ORTHO05D006132 8.2e-99 364.8 357 54.9
FAN06G0735 Fragaria x ananassa HOM05D005147 ORTHO05D006132 1.8e-98 363.6 367 54.0
A10p22800 Brassica napus HOM05D001331 ORTHO05D006132 2.4e-98 363.2 386 51.6
BraA10t44347Z Brassica rapa HOM05D005147 ORTHO05D006132 3.1e-98 362.8 386 51.3
Lsat_1_v5_gn_1_127920 Lactuca sativa HOM05D005147 ORTHO05D006132 5.3e-98 362.1 371 53.9
Actinidia40010 Actinidia chinensis HOM05D005147 ORTHO05D006132 2.6e-97 359.8 337 59.6
Medtr1g078210 Medicago truncatula HOM05D005147 ORTHO05D006132 1.0e-96 357.8 376 52.7
Thecc.07G106800 Theobroma cacao HOM05D005147 ORTHO05D006132 1.1e-95 354.4 354 56.5
AUR62006615 Chenopodium quinoa HOM05D005147 ORTHO05D006132 5.1e-93 345.5 357 52.9
Mapoly0021s0138 Marchantia polymorpha HOM05D005147 ORTHO05D006132 5.1e-93 345.5 386 48.2
GSVIVG01007182001 Vitis vinifera HOM05D005147 ORTHO05D006132 9.1e-90 334.7 355 53.2
Thhalv10013396m.g Eutrema salsugineum HOM05D005147 ORTHO05D006132 2.0e-89 333.6 387 50.1
Sabra10G0137300 Salix brachista HOM05D005147 ORTHO05D006132 7.7e-89 331.6 474 43.0
Nitab4.5_0003928g0030 Nicotiana tabacum HOM05D005147 ORTHO05D006132 2.2e-88 330.1 355 50.1
SGA_v2.0_scaffold62G21485 Striga asiatica HOM05D005147 ORTHO05D006132 7.4e-84 315.1 361 49.3
Cpa.g.sc88.4 Carica papaya HOM05D005147 ORTHO05D006132 1.1e-82 311.2 353 50.7
FAN10G0474 Fragaria x ananassa HOM05D005147 ORTHO05D001533 4.1e-82 309.3 368 48.1
SMO364G0719 Selaginella moellendorffii HOM05D005147 ORTHO05D006132 4.2e-79 299.3 381 43.0
FvH4_7g28070 Fragaria vesca HOM05D005147 ORTHO05D001533 3.9e-77 292.7 298 54.7
Glyma.20G218800 Glycine max HOM05D005147 ORTHO05D006132 4.7e-70 269.2 203 68.0
SHI13696 Sapria himalayana HOM05D005147 ORTHO05D006132 1.0e-69 268.1 305 53.8
GSVIVG01003992001 Vitis vinifera HOM05D005147 ORTHO05D006132 7.0e-66 255.4 184 72.8
CBR_g50472 Chara braunii HOM05D005147 ORTHO05D006132 3.5e-65 253.1 522 33.9
Pp3c20_9510 Physcomitrium patens HOM05D005147 ORTHO05D006132 1.3e-64 251.1 307 47.2
AagrBONN_evm.TU.Sc2ySwM_368.1306 Anthoceros agrestis HOM05D005147 ORTHO05D006132 1.1e-63 248.1 345 41.2
Potri.008G078200 Populus trichocarpa HOM05D005147 ORTHO05D006132 6.1e-62 242.3 191 66.5
TPR.G10532 Trifolium pratense HOM05D005147 ORTHO05D006132 4.5e-57 226.1 210 59.5
CARHR197050 Cardamine hirsuta HOM05D005147 ORTHO05D006132 2.9e-56 223.4 196 62.2
Zm00001eb321590 Zea mays HOM05D005147 ORTHO05D006132 1.4e-53 214.5 138 73.9
Oeu040505.2 Olea europaea HOM05D005147 ORTHO05D006132 4.0e-53 213.0 159 67.3
MBI07_g33483_MAGBIO Magnolia biondii HOM05D005147 ORTHO05D006132 3.7e-51 206.5 160 63.8
Haze_04614 Corylus avellana HOM05D005147 ORTHO05D006132 1.4e-45 188.0 171 55.6
Zm00001eb058540 Zea mays HOM05D005147 ORTHO05D006132 2.3e-45 187.2 125 72.0
Cre17.g707050 Chlamydomonas reinhardtii HOM05D005147 ORTHO05D006132 8.3e-43 178.7 433 32.3
Zm00001eb092200 Zea mays HOM05D005147 ORTHO05D006132 9.2e-42 175.3 128 66.4
CBR_g19604 Chara braunii HOM05D005147 ORTHO05D006132 7.8e-41 172.2 442 30.3
Nitab4.5_0000798g0160 Nicotiana tabacum HOM05D005147 ORTHO05D006132 2.1e-38 164.1 118 66.9
HPP92_011450 Vanilla planifolia HOM05D005147 ORTHO05D006132 6.8e-37 159.1 282 35.1
ClCG04G001680 Citrullus lanatus HOM05D005147 ORTHO05D006132 8.9e-37 158.7 158 51.9
ClCG04G001690 Citrullus lanatus HOM05D005147 ORTHO05D006132 1.1e-34 151.8 91 80.2
Actinidia05852 Actinidia chinensis HOM05D005147 ORTHO05D006132 7.0e-34 149.1 91 78.0
SEGI_04471 Sequoiadendron giganteum HOM05D005147 ORTHO05D006132 1.6e-33 147.9 108 69.4
Nitab4.5_0015042g0010 Nicotiana tabacum HOM05D005147 ORTHO05D006132 1.7e-32 144.4 119 60.5
MCO16G453 Micromonas commoda HOM05D005147 ORTHO05D006132 1.3e-27 128.3 123 55.3
Migut.F02088 Erythranthe guttata HOM05D005147 ORTHO05D006132 8.3e-27 125.6 160 43.8
PRCOL_00001696 Prasinoderma coloniale HOM05D005147 ORTHO05D006132 2.2e-19 100.9 232 33.6
Cc06_g17710 Coffea canephora HOM05D005147 ORTHO05D006132 1.6e-17 94.7 205 34.6
SHI13697 Sapria himalayana HOM05D005147 ORTHO05D000014 6.0e-17 92.8 69 56.5
Hma1.2p1_1029F.1_g249580 Hydrangea macrophylla HOM05D005147 ORTHO05D006132 2.3e-16 90.9 264 28.8
Hma1.2p1_3112F.1_g332769 Hydrangea macrophylla HOM05D005147 ORTHO05D006132 2.3e-16 90.9 264 28.8
HPP92_011449 Vanilla planifolia HOM05D005147 ORTHO05D006132 6.9e-13 79.3 55 76.4
Cfa026444 Carpinus fangiana HOM05D005147 ORTHO05D006132 2.0e-12 77.8 248 27.4
CBR_g21137 Chara braunii HOM05D005147 ORTHO05D006132 9.3e-10 68.9 178 30.3
Cre07.g328400 Chlamydomonas reinhardtii HOM05D005264 ORTHO05D005428 9.3e-10 68.9 103 36.9
AagrBONN_evm.TU.Sc2ySwM_344.985 Anthoceros agrestis HOM05D005264 ORTHO05D005428 4.3e-07 60.1 99 31.3
TWI77G0283 Tripterygium wilfordii HOM05D005264 ORTHO05D005428 9.6e-07 58.9 67 41.8
MCO15G549 Micromonas commoda HOM05D005264 ORTHO05D005428 2.1e-06 57.8 90 33.3
CANSAT54G0937 Cannabis sativa HOM05D005264 ORTHO05D005428 3.6e-06 57.0 67 41.8
COL.COLO4_16614 Corchorus olitorius HOM05D005264 ORTHO05D005428 3.6e-06 57.0 68 39.7
Lalb_Chr04g0258911 Lupinus albus HOM05D005264 ORTHO05D005428 3.6e-06 57.0 68 39.7
Lalb_Chr10g0095091 Lupinus albus HOM05D005264 ORTHO05D005428 4.8e-06 56.6 67 41.8
SHI04181 Sapria himalayana HOM05D005264 ORTHO05D005428 4.8e-06 56.6 90 34.4
CiPaw.05G167900 Carya illinoinensis HOM05D005264 ORTHO05D005428 6.2e-06 56.2 67 38.8
Sc10g0006820 Simmondsia chinensis HOM05D005264 ORTHO05D005428 6.2e-06 56.2 67 40.3
Gohir.D07G112100 Gossypium hirsutum HOM05D005264 ORTHO05D005428 8.1e-06 55.8 67 41.8
Hund27680 Selenicereus undatus HOM05D005264 ORTHO05D005428 8.1e-06 55.8 91 33.0
Hund27681 Selenicereus undatus HOM05D005264 ORTHO05D005428 8.1e-06 55.8 91 33.0
TAR622G0680 Trochodendron aralioides HOM05D005264 ORTHO05D005428 8.1e-06 55.8 90 33.3


User provided reference genes

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