Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
ZM04G41300
(Zea mays)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Zea mays | Orthologous gene family | ZM04G41300 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | ZM04G41300 | 1 | ||
| Tree-based ortholog | ZM04G41300 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00029G01910 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00029G01910 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00029G01910 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL6G09590 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G09590 | 1 | ||
| Tree-based ortholog | 1-to-1 | AL6G09590 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT5G09920 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G09920 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT5G09920 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV7G00410 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G00410 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV7G00410 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR02G02240 BR03G03790 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR02G02240 BR03G03790 | 2 | ||
| Tree-based ortholog | 1-to-many | BR03G03790 BR02G02240 BR10G23390 | 3 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_006G08160 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G08160 | 1 | ||
| Tree-based ortholog | 1-to-1 | CRU_006G08160 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00191G00110 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00191G00110 | 1 | ||
| Tree-based ortholog | 1-to-many | CP00003G03430 CP00191G00110 | 2 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR07G00280 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR07G00280 | 1 | ||
| Tree-based ortholog | 1-to-1 | CR07G00280 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL11G13490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G13490 | 1 | ||
| Tree-based ortholog | 1-to-many | CL11G13490 CL11G13220 | 2 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00063G00110 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00063G00110 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00063G00110 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-many | CM00040G02560 CM00051G01330 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CM00051G01330 CM00040G02560 | 2 | ||
| Tree-based ortholog | 1-to-many | CM00051G01330 CM00040G02560 | 2 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0009G02580 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G02580 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0009G02580 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV1G27630 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G27630 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV1G27630 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM03G22220 GM05G32260 GM16G09890 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM05G32260 GM16G09890 GM03G22220 | 3 | ||
| Tree-based ortholog | 1-to-many | GM16G09890 GM03G22220 GM05G32260 | 3 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR06G23810 GR11G11380 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR11G11380 GR06G23810 | 2 | ||
| Tree-based ortholog | 1-to-many | GR11G11380 GR06G23810 | 2 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ3G010070 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G010070 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ3G010070 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD17G016960 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD17G016960 | 1 | ||
| Tree-based ortholog | 1-to-many | MD06G020000 MD14G022250 MD17G016960 | 3 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME03614G02790 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03614G02790 | 1 | ||
| Tree-based ortholog | 1-to-many | ME03614G02790 ME02903G00070 | 2 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT8G011890 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G011890 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT8G011890 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS02G02510 | 1 | |
| Anchor point | N/A | OS02G02510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G02510 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS02G02510 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | 1-to-many | OL09G00150 OL21G01690 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL21G01690 OL09G00150 | 2 | ||
| Tree-based ortholog | 1-to-many | OL09G00150 OL21G01690 | 2 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00089G00070 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00089G00070 | 1 | ||
| Tree-based ortholog | 1-to-1 | PP00089G00070 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT05G08490 PT07G08040 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT05G08490 PT07G08040 | 2 | ||
| Tree-based ortholog | 1-to-many | PT07G08040 PT05G08490 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_006G17800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G17800 | 1 | ||
| Tree-based ortholog | 1-to-many | PPE_005G23870 PPE_006G17800 | 2 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29680G00710 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29680G00710 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC29680G00710 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL06G073870 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G073870 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL06G073870 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST06G030280 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G030280 | 1 | ||
| Tree-based ortholog | 1-to-many | ST06G030280 ST11G006070 | 2 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP6G33490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G33490 | 1 | ||
| Tree-based ortholog | 1-to-1 | TP6G33490 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0001G10960 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G10960 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0001G10960 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV12G03440 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G03440 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV12G03440 | 1 |