Integrative Orthology Viewer: VV08G12210 (Vitis vinifera)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Vitis vinifera | Orthologous gene family | VV04G08240 VV04G08250 VV08G12210 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | VV08G12210 | 1 | ||
Tree-based ortholog | VV08G12210 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00039G00550 ATR_00064G00520 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00039G00550 ATR_00064G00520 | 2 | ||
Tree-based ortholog | 1-to-many | ATR_00064G00520 ATR_00039G00550 ATR_00019G02460 | 3 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G49640 AL3G14420 AL3G14430 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G21590 | 1 | ||
Tree-based ortholog | 1-to-1 | AL4G21590 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G55120 AT2G36190 AT3G13784 ... | 6 | |
Anchor point | N/A | AT3G52600 AT2G36190 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G52600 | 1 | ||
Tree-based ortholog | 1-to-many | AT2G36190 AT3G52600 | 2 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV2G02900 BV7G03420 BV7G03430 ... | 7 | |
Anchor point | N/A | BV7G11850 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G03420 | 1 | ||
Tree-based ortholog | 1-to-1 | BV7G11860 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G34490 BR03G04690 BR03G17850 ... | 9 | |
Anchor point | N/A | BR03G17850 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G05630 | 1 | ||
Tree-based ortholog | 1-to-many | BR03G17850 BR04G21610 BR04G05630 | 3 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G41530 CRU_003G12730 CRU_003G12740 ... | 7 | |
Anchor point | N/A | CRU_005G17870 CRU_004G17360 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G17870 | 1 | ||
Tree-based ortholog | 1-to-many | CRU_004G17360 CRU_005G17870 | 2 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00104G01000 CP00249G00030 | 2 | |
Anchor point | N/A | CP00104G01000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00104G01000 | 1 | ||
Tree-based ortholog | 1-to-1 | CP00104G01000 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR12G02240 CR12G05230 CR12G02230 | 3 | |
Tree-based ortholog | 1-to-many | CR12G05230 CR12G05240 CR12G02240 ... | 6 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL05G19030 CL08G16640 CL10G16870 | 3 | |
Anchor point | N/A | CL10G16870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G16870 | 1 | ||
Tree-based ortholog | 1-to-1 | CL10G16870 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00032G01150 | 1 | |
Anchor point | N/A | CS00018G00380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00018G00380 | 1 | ||
Tree-based ortholog | 1-to-1 | CS00018G00380 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00011G04180 CM00029G02550 CM00067G01660 ... | 4 | |
Anchor point | N/A | CM00011G04180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00029G02550 | 1 | ||
Tree-based ortholog | 1-to-1 | CM00011G04180 | 1 | ||
Eucalyptus grandis | Anchor point | N/A | EG0001G22360 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G22360 | 1 | ||
Tree-based ortholog | 1-to-1 | EG0001G22360 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G14490 FV4G20340 FV4G20390 ... | 5 | |
Anchor point | N/A | FV6G31950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G31960 | 1 | ||
Tree-based ortholog | 1-to-many | FV6G31950 FV6G31960 | 2 | ||
Glycine max | Orthologous gene family | many-to-many | GM03G35520 GM07G01090 GM08G20480 ... | 13 | |
Anchor point | N/A | GM10G08670 GM19G38160 GM03G35520 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM10G08670 | 1 | ||
Tree-based ortholog | 1-to-many | GM10G08670 GM20G03620 GM20G03640 ... | 8 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR03G05910 GR06G15370 GR09G40050 ... | 6 | |
Anchor point | N/A | GR02G23860 GR09G40050 GR06G15370 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G15370 | 1 | ||
Tree-based ortholog | 1-to-many | GR06G15370 GR09G40050 GR02G23860 ... | 4 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G024460 LJ3G037470 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G037470 | 1 | ||
Tree-based ortholog | 1-to-many | LJ3G037470 LJ5G004870 LJ1G024460 | 3 | ||
Malus domestica | Orthologous gene family | many-to-many | MD12G002630 MD14G002230 | 2 | |
Anchor point | N/A | MD12G002630 MD14G002230 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD12G002630 | 1 | ||
Tree-based ortholog | 1-to-many | MD14G002230 MD12G002630 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME00206G00190 ME02892G00120 ME05875G00690 ... | 6 | |
Anchor point | N/A | ME06550G00970 ME02892G00120 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME02892G00120 ME06550G00980 ME06550G00970 | 3 | ||
Tree-based ortholog | 1-to-many | ME06550G00980 ME06550G00970 ME02892G00120 | 3 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G015910 MT1G015940 MT1G015970 ... | 8 | |
Anchor point | N/A | MT7G105050 MT1G059700 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G105050 | 1 | ||
Tree-based ortholog | 1-to-many | MT1G059700 MT7G105050 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G73580 OS02G33110 OS04G33720 ... | 8 | |
Anchor point | N/A | OS02G33110 OS04G33720 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G33720 | 1 | ||
Tree-based ortholog | 1-to-many | OS04G33740 OS02G33110 OS04G33720 ... | 4 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00371G00160 PP00177G00130 PP00066G00150 ... | 5 | |
Tree-based ortholog | 1-to-many | PP00051G01780 PP00037G00680 PP00371G00160 ... | 9 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT06G21060 PT16G07740 PT16G07750 | 3 | |
Anchor point | N/A | PT16G07740 PT06G21060 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT16G07750 PT06G21060 PT16G07740 | 3 | ||
Tree-based ortholog | 1-to-many | PT16G07740 PT16G07750 PT06G21060 | 3 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_003G03480 PPE_007G12560 PPE_007G12570 ... | 6 | |
Anchor point | N/A | PPE_007G12560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PPE_007G12570 PPE_007G12580 | 2 | ||
Tree-based ortholog | 1-to-many | PPE_007G12570 PPE_007G12560 PPE_007G12580 ... | 4 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC28629G00190 RC28629G00200 RC29706G00800 ... | 4 | |
Anchor point | N/A | RC28629G00190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | RC28629G00200 RC28629G00190 | 2 | ||
Tree-based ortholog | 1-to-many | RC28629G00190 RC28629G00200 | 2 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G121680 SL06G064620 SL09G010080 ... | 9 | |
Anchor point | N/A | SL09G010080 SL10G083290 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G083290 | 1 | ||
Tree-based ortholog | 1-to-many | SL10G083290 SL10G083300 SL09G010080 ... | 7 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST03G035270 ST06G020600 ST06G020610 ... | 9 | |
Anchor point | N/A | ST09G009900 ST10G025810 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G025820 | 1 | ||
Tree-based ortholog | 1-to-many | ST10G025820 ST10G025810 ST09G009910 ... | 6 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G40780 TP3G12000 TP3G12010 ... | 7 | |
Anchor point | N/A | TP4G18410 TP5G09700 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G18410 | 1 | ||
Tree-based ortholog | 1-to-many | TP4G18410 TP5G09700 | 2 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0005G09010 TC0005G21970 | 2 | |
Anchor point | N/A | TC0005G08930 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G08960 | 1 | ||
Tree-based ortholog | 1-to-many | TC0005G08960 TC0005G09010 TC0005G08930 | 3 | ||
Zea mays | Orthologous gene family | many-to-many | ZM02G01350 ZM02G01370 ZM02G01380 ... | 8 | |
Anchor point | N/A | ZM02G15950 ZM05G29860 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G16180 | 1 | ||
Tree-based ortholog | 1-to-many | ZM10G16170 ZM02G15950 ZM05G29860 ... | 4 |