Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
TP6G00030
(Thellungiella parvula)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Thellungiella parvula | Orthologous gene family | TP1G00180 TP6G00030 | 2 |  |
| Anchor point | TP1G00180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | TP6G00030 | 1 | ||
| Tree-based ortholog | TP6G00030 TP1G00180 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00111G00900 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00111G00900 | 1 | ||
| Tree-based ortholog | many-to-1 | ATR_00111G00900 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL1G00160 | 1 | |
| Anchor point | 1-to-many | AL6G41710 AL1G00160 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G00160 | 1 | ||
| Tree-based ortholog | many-to-1 | AL1G00160 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT1G02090 | 1 | |
| Anchor point | 1-to-1 | AT1G02090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G02090 | 1 | ||
| Tree-based ortholog | many-to-1 | AT1G02090 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV0G64190 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G64190 | 1 | ||
| Tree-based ortholog | many-to-1 | BV0G64190 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR07G09680 BR09G55070 | 2 | |
| Anchor point | 1-to-many | BR10G06570 BR09G55070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G55070 | 1 | ||
| Tree-based ortholog | many-to-many | BR09G55070 BR07G09680 | 2 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_001G00120 | 1 | |
| Anchor point | 1-to-many | CRU_006G35950 CRU_001G00120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G00120 | 1 | ||
| Tree-based ortholog | many-to-1 | CRU_001G00120 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00101G00140 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00101G00140 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00101G00140 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR16G02140 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR16G02140 | 1 | ||
| Tree-based ortholog | many-to-1 | CR16G02140 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL06G03130 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G03130 | 1 | ||
| Tree-based ortholog | many-to-1 | CL06G03130 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00001G00720 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00001G00720 | 1 | ||
| Tree-based ortholog | many-to-1 | CS00001G00720 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00052G00500 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00052G00500 | 1 | ||
| Tree-based ortholog | many-to-1 | CM00052G00500 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0004G09950 EG0276G00030 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0276G00030 EG0004G09950 | 2 | ||
| Tree-based ortholog | many-to-many | EG0004G09950 EG0276G00030 | 2 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV5G32220 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G32220 | 1 | ||
| Tree-based ortholog | many-to-1 | FV7G13140 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM13G25690 GM15G35760 GM18G48710 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM13G25690 | 1 | ||
| Tree-based ortholog | many-to-1 | GM15G35760 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR07G08590 GR08G10870 | 2 | |
| Anchor point | 1-to-1 | GR04G03910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G08590 | 1 | ||
| Tree-based ortholog | many-to-many | GR08G10870 GR07G08590 | 2 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD02G021460 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD02G021460 | 1 | ||
| Tree-based ortholog | many-to-1 | MD00G424800 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME04450G00540 ME08265G04400 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04450G00540 | 1 | ||
| Tree-based ortholog | many-to-many | ME04450G00540 ME08265G04400 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT7G081735 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G081735 | 1 | ||
| Tree-based ortholog | many-to-1 | MT7G081735 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS07G30840 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G30840 | 1 | ||
| Tree-based ortholog | many-to-1 | OS07G30840 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-many | OL13G01420 OL21G01560 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL21G01560 OL13G01420 | 2 | ||
| Tree-based ortholog | many-to-many | OL21G01560 OL13G01420 | 2 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00089G00730 PP00271G00500 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00271G00500 PP00089G00730 | 2 | ||
| Tree-based ortholog | many-to-many | PP00271G00500 PP00089G00730 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT02G13740 PT14G04720 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT14G04720 PT02G13740 | 2 | ||
| Tree-based ortholog | many-to-1 | PT02G13740 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_005G06590 PPE_007G10290 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G10290 | 1 | ||
| Tree-based ortholog | many-to-many | PPE_005G06590 PPE_007G10290 | 2 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30174G00100 | 1 | |
| Anchor point | 1-to-1 | RC30174G00100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30174G00100 | 1 | ||
| Tree-based ortholog | many-to-1 | RC29983G00030 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G090290 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G090290 | 1 | ||
| Tree-based ortholog | many-to-1 | SL01G090290 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST01G029430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G029430 | 1 | ||
| Tree-based ortholog | many-to-1 | ST01G029430 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0001G38980 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G38980 | 1 | ||
| Tree-based ortholog | many-to-1 | TC0001G38980 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV02G00590 VV15G01120 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV15G01120 | 1 | ||
| Tree-based ortholog | many-to-1 | VV02G00580 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM02G35640 ZM07G22100 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM07G22100 ZM02G35640 | 2 | ||
| Tree-based ortholog | many-to-many | ZM07G22100 ZM02G35640 | 2 |