Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
TC0009G24460
(Theobroma cacao)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Theobroma cacao | Orthologous gene family | TC0009G24460 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | TC0009G24460 | 1 | ||
| Tree-based ortholog | TC0009G24460 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00063G00710 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00063G00710 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00063G00710 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL7G12670 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G12670 | 1 | ||
| Tree-based ortholog | 1-to-1 | AL7G12670 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT4G29070 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G29070 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT4G29070 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV4G13870 | 1 | |
| Anchor point | N/A | BV4G13870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G13870 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV4G13870 | 1 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G08150 | 1 | |
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_007G10860 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G10860 | 1 | ||
| Tree-based ortholog | 1-to-1 | CRU_007G10860 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00157G00630 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00157G00630 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00157G00630 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL02G22900 | 1 | |
| Anchor point | N/A | CL02G22900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G22900 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL02G22900 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00120G00240 | 1 | |
| Anchor point | N/A | CS00120G00240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00120G00240 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00120G00240 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00022G03880 | 1 | |
| Anchor point | N/A | CM00022G03880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00022G03880 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00022G03880 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0002G31260 | 1 | |
| Anchor point | N/A | EG0002G31260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G31260 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0002G31260 | 1 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G47800 | 1 | |
| Glycine max | Orthologous gene family | 1-to-many | GM07G35943 GM20G08070 | 2 | |
| Anchor point | N/A | GM07G35943 GM20G08070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM07G35943 GM20G08070 | 2 | ||
| Tree-based ortholog | 1-to-many | GM20G08070 GM07G35943 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR01G13360 | 1 | |
| Anchor point | N/A | GR01G13360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR01G13360 | 1 | ||
| Tree-based ortholog | 1-to-1 | GR01G13360 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD00G320810 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G320810 | 1 | ||
| Tree-based ortholog | 1-to-many | MD00G320810 MD00G516140 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME06916G01290 ME07991G00060 | 2 | |
| Anchor point | N/A | ME06916G01290 ME07991G00060 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME06916G01290 ME07991G00060 | 2 | ||
| Tree-based ortholog | 1-to-many | ME07991G00060 ME06916G01290 | 2 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT00G27240 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT00G27240 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT00G27240 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS07G46420 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G46420 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS07G46420 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-many | PP00078G00340 PP00104G01030 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00078G00340 PP00104G01030 | 2 | ||
| Tree-based ortholog | 1-to-many | PP00078G00340 PP00104G01030 | 2 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT01G27530 | 1 | |
| Anchor point | N/A | PT01G27530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT01G27530 | 1 | ||
| Tree-based ortholog | 1-to-1 | PT01G27530 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_004G29250 | 1 | |
| Anchor point | N/A | PPE_004G29250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G29250 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_004G29250 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30142G00050 | 1 | |
| Anchor point | N/A | RC30142G00050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30142G00050 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC30142G00050 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL01G008780 | 1 | |
| Anchor point | N/A | SL01G008780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G008780 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL01G008780 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST01G009470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G009470 | 1 | ||
| Tree-based ortholog | 1-to-1 | ST01G009470 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP7G27010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G27010 | 1 | ||
| Tree-based ortholog | 1-to-1 | TP7G27010 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV06G10950 | 1 | |
| Anchor point | N/A | VV06G10950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G10950 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV06G10950 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM02G40230 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G40230 | 1 | ||
| Tree-based ortholog | 1-to-1 | ZM02G40230 | 1 |