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Integrative Orthology Viewer:
TC0004G31430
(Theobroma cacao)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Theobroma cacao | Orthologous gene family | TC0001G17110 TC0004G31430 TC0004G31440 ... | 7 |  |
| Best-Hits-and-Inparalogs(BHI)family | TC0004G31430 | 1 | ||
| Tree-based ortholog | TC0004G31430 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00045G01180 ATR_00106G00480 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00045G01180 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00045G01180 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G12210 AL1G53330 AL2G03250 ... | 4 | |
| Anchor point | N/A | AL1G53330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G12210 | 1 | ||
| Tree-based ortholog | 1-to-many | AL1G53330 AL2G17370 | 2 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G11910 AT1G62290 AT4G04460 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G11910 | 1 | ||
| Tree-based ortholog | 1-to-many | AT1G69100 AT4G22050 | 2 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV0G59530 BV4G08570 BV8G12890 | 3 | |
| Anchor point | N/A | BV0G09230 BV4G08570 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G08570 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV0G09240 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR00G04880 BR03G26410 BR08G28530 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G49980 | 1 | ||
| Tree-based ortholog | 1-to-many | BR09G15790 BR03G46200 BR03G04940 ... | 6 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G10980 CRU_002G02610 CRU_002G06740 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G10980 | 1 | ||
| Tree-based ortholog | 1-to-many | CRU_002G06740 CRU_004G00670 CRU_007G18370 ... | 5 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00048G02220 CP00087G00940 CP00152G00340 ... | 5 | |
| Anchor point | N/A | CP00048G02220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00048G02220 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00648G00010 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR04G04480 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR04G04480 | 1 | ||
| Tree-based ortholog | 1-to-1 | CR04G04480 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL01G21910 CL03G04420 CL10G04600 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G04420 | 1 | ||
| Tree-based ortholog | 1-to-many | CL03G04420 CL01G21920 CL01G21910 ... | 4 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00007G03050 CS00016G02430 CS00049G00110 ... | 5 | |
| Anchor point | N/A | CS00016G02430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00395G00040 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00016G02430 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00001G05450 CM00007G04330 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00001G05450 | 1 | ||
| Tree-based ortholog | 1-to-many | CM00001G05450 CM00007G04330 CM00021G04890 | 3 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G08940 EG0002G14630 EG0004G10860 ... | 6 | |
| Anchor point | N/A | EG0008G33470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G14630 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0008G33480 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV3G01370 FV3G25660 FV4G18650 ... | 4 | |
| Anchor point | N/A | FV4G18650 FV6G03680 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G03680 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV4G18650 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM03G38730 GM07G39240 GM09G00810 ... | 12 | |
| Anchor point | N/A | GM10G28370 GM15G21010 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM09G09390 GM15G21010 | 2 | ||
| Tree-based ortholog | 1-to-many | GM13G17710 GM17G04800 GM09G09390 ... | 4 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR02G09110 GR04G03180 GR04G23520 ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G07380 | 1 | ||
| Tree-based ortholog | 1-to-1 | GR05G07380 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ1G069320 LJ3G004720 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G069320 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ3G004720 | 1 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD15G033660 | 1 | |
| Tree-based ortholog | 1-to-1 | MD15G033660 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME00111G00040 ME02264G00790 ME03241G00120 ... | 7 | |
| Anchor point | N/A | ME10305G00720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02264G00790 | 1 | ||
| Tree-based ortholog | 1-to-1 | ME00111G00040 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G484940 MT2G023910 MT2G045420 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G123563 | 1 | ||
| Tree-based ortholog | 1-to-many | MT4G123563 MT2G045420 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G18630 OS01G44130 OS01G47410 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G18630 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS01G18630 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL11G03050 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL11G03050 | 1 | ||
| Tree-based ortholog | 1-to-1 | OL11G03050 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00093G00380 PP00099G00440 PP00113G00100 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00093G00380 PP00113G00100 | 2 | ||
| Tree-based ortholog | 1-to-many | PP00113G00100 PP00093G00380 PP00099G00440 | 3 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G35690 PT02G22830 PT04G00760 ... | 7 | |
| Anchor point | N/A | PT13G00220 PT10G00340 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT13G00220 | 1 | ||
| Tree-based ortholog | 1-to-1 | PT10G00340 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G09680 PPE_003G19490 PPE_004G01630 ... | 5 | |
| Anchor point | N/A | PPE_001G09680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G31030 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_001G09680 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29842G00530 RC29889G01780 RC30010G00230 ... | 5 | |
| Anchor point | N/A | RC29889G01780 RC30128G03690 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30128G03690 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC29889G01780 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G101240 SL02G032940 SL02G080880 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G101240 | 1 | ||
| Tree-based ortholog | 1-to-many | SL09G082760 SL03G005280 | 2 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST01G039110 ST02G008610 ST02G024010 ... | 6 | |
| Anchor point | N/A | ST01G039110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G039110 | 1 | ||
| Tree-based ortholog | 1-to-many | ST09G024370 ST03G005510 | 2 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G10560 TP2G02340 TP2G05940 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G10560 | 1 | ||
| Tree-based ortholog | 1-to-1 | TP2G05940 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV05G02600 VV10G00710 VV14G10320 ... | 5 | |
| Anchor point | N/A | VV05G02600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G10340 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV05G02600 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G42430 ZM03G36900 ZM05G12710 ... | 9 | |
| Anchor point | N/A | ZM10G11820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G00120 | 1 | ||
| Tree-based ortholog | 1-to-many | ZM08G00120 ZM10G11820 | 2 |