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Integrative Orthology Viewer:
TC0004G17580
(Theobroma cacao)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Theobroma cacao | Orthologous gene family | TC0004G17580 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | TC0004G17580 | 1 | ||
| Tree-based ortholog | TC0004G17580 TC0007G14320 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00070G00030 | 1 | |
| Tree-based ortholog | many-to-1 | ATR_00070G00030 | 1 | ||
| Arabidopsis lyrata | Anchor point | N/A | AL5G30120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G30120 | 1 | ||
| Tree-based ortholog | many-to-many | AL5G30120 AL1G49470 | 2 | ||
| Arabidopsis thaliana | Anchor point | N/A | AT3G59600 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G59600 | 1 | ||
| Tree-based ortholog | many-to-many | AT3G59600 AT1G54250 | 2 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G11570 | 1 | |
| Tree-based ortholog | many-to-1 | BV4G11570 | 1 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G39300 | 1 | |
| Tree-based ortholog | many-to-1 | BR09G39300 | 1 | ||
| Capsella rubella | Anchor point | N/A | CRU_005G24920 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G24920 | 1 | ||
| Tree-based ortholog | many-to-many | CRU_005G24920 CRU_001G41430 | 2 | ||
| Carica papaya | Anchor point | N/A | CP00009G03260 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00009G03260 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00009G03260 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G07770 | 1 | |
| Tree-based ortholog | many-to-1 | CR02G07770 | 1 | ||
| Citrullus lanatus | Anchor point | N/A | CL07G18200 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G18200 | 1 | ||
| Tree-based ortholog | many-to-1 | CL07G18200 | 1 | ||
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00162G00140 | 1 | |
| Tree-based ortholog | many-to-1 | CS00162G00140 | 1 | ||
| Cucumis melo | Anchor point | N/A | CM00031G02470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00031G02470 | 1 | ||
| Tree-based ortholog | many-to-1 | CM00031G02470 | 1 | ||
| Eucalyptus grandis | Anchor point | N/A | EG0001G00180 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0381G00010 EG0001G00180 | 2 | ||
| Tree-based ortholog | many-to-many | EG0001G00180 EG0381G00010 EG0001G00230 | 3 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G15200 | 1 | |
| Tree-based ortholog | many-to-1 | FV7G15200 | 1 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM09G15750 GM02G26791 | 2 | |
| Tree-based ortholog | many-to-many | GM02G26791 GM09G15750 | 2 | ||
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G35360 | 1 | |
| Tree-based ortholog | many-to-many | GR02G03610 GR09G35360 | 2 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G018040 | 1 | |
| Tree-based ortholog | many-to-1 | LJ5G018040 | 1 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD02G021790 | 1 | |
| Tree-based ortholog | many-to-many | MD00G101910 MD02G021790 | 2 | ||
| Manihot esculenta | Anchor point | N/A | ME05280G00050 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME05280G00050 ME08245G00050 | 2 | ||
| Tree-based ortholog | many-to-many | ME08245G00050 ME05280G00050 | 2 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G056890 | 1 | |
| Tree-based ortholog | many-to-1 | MT1G056890 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G48230 | 1 | |
| Tree-based ortholog | many-to-many | OS03G62870 OS06G48230 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL10G01290 | 1 | |
| Tree-based ortholog | many-to-1 | OL10G01290 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00030G00810 | 1 | |
| Tree-based ortholog | many-to-1 | PP00030G00810 | 1 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT13G12050 | 1 | |
| Tree-based ortholog | many-to-1 | PT13G12050 | 1 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G25630 | 1 | |
| Tree-based ortholog | many-to-1 | PPE_004G25630 | 1 | ||
| Ricinus communis | Anchor point | N/A | RC30000G00110 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30000G00110 | 1 | ||
| Tree-based ortholog | many-to-1 | RC30000G00110 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G031690 | 1 | |
| Tree-based ortholog | many-to-many | SL01G081150 SL03G031690 | 2 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G008160 | 1 | |
| Tree-based ortholog | many-to-many | ST01G027990 ST03G008160 | 2 | ||
| Thellungiella parvula | Anchor point | N/A | TP5G03560 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TP1G40680 TP5G03560 | 2 | ||
| Tree-based ortholog | many-to-many | TP5G03560 TP1G40680 | 2 | ||
| Vitis vinifera | Anchor point | N/A | VV05G12890 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G12890 | 1 | ||
| Tree-based ortholog | many-to-many | VV05G12890 VV05G12910 | 2 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G00590 | 1 | |
| Tree-based ortholog | many-to-1 | ZM05G14380 | 1 |