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Integrative Orthology Viewer:
TC0003G10550
(Theobroma cacao)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Theobroma cacao | Orthologous gene family | TC0003G10550 TC0004G10000 | 2 |  |
| Anchor point | TC0004G10000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | TC0003G10550 | 1 | ||
| Tree-based ortholog | TC0003G10550 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00154G00130 | 1 | |
| Anchor point | 1-to-many | ATR_00154G00130 ATR_00009G01630 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00154G00130 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00154G00130 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL5G09260 AL8G27200 | 2 | |
| Anchor point | 1-to-1 | AL8G27200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G27200 | 1 | ||
| Tree-based ortholog | 1-to-1 | AL8G27200 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G29400 AT5G61010 | 2 | |
| Anchor point | 1-to-many | AT5G61010 AT3G29400 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G61010 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT5G61010 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV2G01660 | 1 | |
| Anchor point | 1-to-1 | BV2G01660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G01660 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV0G76020 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR02G31560 BR03G40670 BR06G31650 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G40670 | 1 | ||
| Tree-based ortholog | 1-to-1 | BR03G40670 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_005G07560 CRU_008G21100 | 2 | |
| Anchor point | 1-to-1 | CRU_008G21100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G21100 | 1 | ||
| Tree-based ortholog | 1-to-1 | CRU_008G21100 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00013G01150 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00013G01150 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR10G00900 | 1 | |
| Citrullus lanatus | Orthologous gene family | many-to-many | CL04G11580 CL07G17010 | 2 | |
| Anchor point | 1-to-1 | CL04G11580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G11580 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL04G11580 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00015G02550 CS00030G01070 | 2 | |
| Anchor point | 1-to-many | CS00015G02550 CS00030G01070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00030G01070 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00030G01070 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00001G01200 CM00071G00800 | 2 | |
| Anchor point | 1-to-1 | CM00001G01200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00001G01200 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00001G01200 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G05160 EG0009G17040 | 2 | |
| Anchor point | 1-to-1 | EG0002G05160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G05160 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0002G05160 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV5G12020 FV6G42590 | 2 | |
| Anchor point | 1-to-1 | FV5G12020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G42590 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV5G12020 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM04G32420 GM06G22160 GM08G26920 ... | 4 | |
| Anchor point | 1-to-many | GM08G26920 GM04G32420 GM18G50160 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM04G32420 GM06G22160 | 2 | ||
| Tree-based ortholog | 1-to-many | GM06G22160 GM04G32420 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR06G01050 GR06G26810 GR08G19930 ... | 4 | |
| Anchor point | 1-to-1 | GR08G19930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G26810 | 1 | ||
| Tree-based ortholog | 1-to-1 | GR06G26810 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G038380 | 1 | |
| Anchor point | 1-to-1 | LJ1G038380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G038380 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ1G038380 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G161520 MD00G272570 MD00G317590 ... | 5 | |
| Anchor point | 1-to-1 | MD09G004700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G272570 MD00G317670 MD00G317590 | 3 | ||
| Tree-based ortholog | 1-to-many | MD00G317630 MD00G317670 MD09G004750 ... | 5 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME04043G02120 ME04043G02130 ME06609G00180 ... | 4 | |
| Anchor point | 1-to-many | ME06656G01120 ME04043G02120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06656G01120 | 1 | ||
| Tree-based ortholog | 1-to-1 | ME06656G01120 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT3G025900 MT7G013770 | 2 | |
| Anchor point | 1-to-1 | MT3G025900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G013770 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT3G025900 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS01G55799 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G55799 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS01G55799 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00169G00210 PP00070G00130 PP00177G00690 ... | 5 | |
| Tree-based ortholog | 1-to-many | PP00177G00690 PP00169G00210 PP00376G00390 ... | 6 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT00G03560 PT00G03570 PT15G05820 ... | 6 | |
| Anchor point | 1-to-many | PT15G05820 PT17G09370 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT15G05820 | 1 | ||
| Tree-based ortholog | 1-to-1 | PT15G05820 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_005G20890 | 1 | |
| Anchor point | 1-to-many | PPE_003G23470 PPE_005G20890 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G20890 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_005G20890 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29905G00040 RC30138G01400 | 2 | |
| Anchor point | 1-to-many | RC30138G01400 RC29905G00040 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30138G01400 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC30138G01400 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G088800 SL03G115070 | 2 | |
| Anchor point | 1-to-many | SL02G088800 SL03G115070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G088800 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL03G115070 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST02G034080 ST03G028610 | 2 | |
| Anchor point | 1-to-many | ST02G034080 ST03G028610 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G034080 | 1 | ||
| Tree-based ortholog | 1-to-1 | ST03G028610 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP2G18000 TP2G24320 | 2 | |
| Anchor point | 1-to-many | TP2G24320 TP2G18000 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G24320 | 1 | ||
| Tree-based ortholog | 1-to-1 | TP2G24320 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV17G02630 | 1 | |
| Anchor point | 1-to-many | VV17G02630 VV14G13000 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G02630 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV17G02630 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM03G31070 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G31070 | 1 | ||
| Tree-based ortholog | 1-to-1 | ZM03G31070 | 1 |