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Integrative Orthology Viewer:
TC0001G00710
(Theobroma cacao)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Theobroma cacao | Orthologous gene family | TC0001G00710 TC0001G00720 | 2 |  |
| Best-Hits-and-Inparalogs(BHI)family | TC0001G00710 | 1 | ||
| Tree-based ortholog | TC0001G00710 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00001G00430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00001G00430 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00001G00430 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL5G21080 AL5G21090 AL5G21100 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G21080 | 1 | ||
| Tree-based ortholog | 1-to-many | AL5G21080 AL5G21090 AL5G21100 | 3 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G51420 AT3G51430 AT3G51440 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G51430 | 1 | ||
| Tree-based ortholog | 1-to-many | AT3G51420 AT3G51450 AT3G51430 ... | 4 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV6G01050 BV6G01070 | 2 | |
| Anchor point | N/A | BV6G01050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G01070 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV6G01070 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR01G21540 BR01G21550 BR09G33160 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G21540 | 1 | ||
| Tree-based ortholog | 1-to-many | BR01G21540 BR09G33160 BR01G21550 | 3 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_005G16670 CRU_005G16690 CRU_005G16700 | 3 | |
| Anchor point | N/A | CRU_005G16670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G16670 | 1 | ||
| Tree-based ortholog | 1-to-many | CRU_005G16670 CRU_005G16700 CRU_005G16690 | 3 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00006G03220 | 1 | |
| Anchor point | N/A | CP00006G03220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00006G03220 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00006G03220 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G15270 | 1 | |
| Tree-based ortholog | 1-to-1 | CR12G15270 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL10G01820 | 1 | |
| Anchor point | N/A | CL10G01820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G01820 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL10G01820 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00017G02060 | 1 | |
| Anchor point | N/A | CS00017G02060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00017G02060 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00017G02060 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00021G00410 | 1 | |
| Anchor point | N/A | CM00021G00410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00021G00410 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00021G00410 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G01010 EG0010G21860 EG0010G21870 ... | 6 | |
| Anchor point | N/A | EG0010G21860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0010G21900 EG0010G21880 EG0010G21870 ... | 5 | ||
| Tree-based ortholog | 1-to-many | EG0001G01010 EG0010G21900 EG0010G21880 ... | 7 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV1G12390 FV1G12400 | 2 | |
| Anchor point | N/A | FV1G12390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G12390 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV1G12390 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM02G04800 GM02G04810 GM16G22650 | 3 | |
| Anchor point | N/A | GM02G04800 GM16G22650 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G04800 GM16G22650 | 2 | ||
| Tree-based ortholog | 1-to-many | GM02G04800 GM16G22650 GM02G04810 | 3 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR03G00340 | 1 | |
| Anchor point | N/A | GR03G00340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR03G00340 | 1 | ||
| Tree-based ortholog | 1-to-1 | GR08G06110 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G015960 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ6G015960 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD15G017120 | 1 | |
| Anchor point | N/A | MD02G010480 MD15G017120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD15G017120 | 1 | ||
| Tree-based ortholog | 1-to-many | MD02G010500 MD00G333170 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME06512G01800 | 1 | |
| Anchor point | N/A | ME06512G01800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06512G01800 | 1 | ||
| Tree-based ortholog | 1-to-1 | ME06512G01800 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT8G074170 MT8G074210 MT8G074270 | 3 | |
| Anchor point | N/A | MT8G074170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT8G074270 MT8G074210 MT8G074170 | 3 | ||
| Tree-based ortholog | 1-to-many | MT8G074270 MT8G074170 MT8G074210 ... | 4 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS10G39710 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS10G39710 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS10G39710 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00011G00290 PP00086G00770 PP00106G00350 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00086G00770 PP00165G00550 PP00106G00350 ... | 4 | ||
| Tree-based ortholog | 1-to-many | PP00011G00290 PP00086G00770 PP00106G00350 | 3 | ||
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT05G09940 | 1 | |
| Anchor point | N/A | PT05G09940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT05G09940 | 1 | ||
| Tree-based ortholog | 1-to-1 | PT05G09940 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_007G19970 | 1 | |
| Anchor point | N/A | PPE_007G19970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G19970 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_007G19970 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29830G00410 | 1 | |
| Anchor point | N/A | RC29830G00400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29830G00410 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC29830G00410 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL02G082900 | 1 | |
| Anchor point | N/A | SL02G082900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G082900 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL02G082900 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST02G026260 | 1 | |
| Anchor point | N/A | ST02G026260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G026260 | 1 | ||
| Tree-based ortholog | 1-to-1 | ST02G026260 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP5G10790 TP5G10800 | 2 | |
| Anchor point | N/A | TP5G10790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TP5G10800 TP5G10790 | 2 | ||
| Tree-based ortholog | 1-to-many | TP5G10790 TP5G10800 | 2 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV04G00040 VV04G00070 VV04G00090 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV04G00040 VV04G00130 VV04G00080 ... | 5 | ||
| Tree-based ortholog | 1-to-many | VV04G00070 VV04G00040 VV04G00050 ... | 9 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G38860 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM02G38860 | 1 |