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Integrative Orthology Viewer:
TC0001G00120
(Theobroma cacao)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Theobroma cacao | Orthologous gene family | TC0001G00120 TC0008G09500 | 2 |  |
| Anchor point | TC0008G09500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | TC0001G00120 | 1 | ||
| Tree-based ortholog | TC0001G00120 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Anchor point | 1-to-1 | ATR_00022G01150 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00044G01090 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00022G01150 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G22130 AL2G25470 | 2 | |
| Anchor point | 1-to-many | AL1G22130 AL3G38250 AL2G25470 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G22130 | 1 | ||
| Tree-based ortholog | 1-to-many | AL1G22130 AL2G25470 | 2 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G20925 AT1G76520 AT1G76530 | 3 | |
| Anchor point | 1-to-many | AT1G20925 AT1G76520 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G20925 | 1 | ||
| Tree-based ortholog | 1-to-many | AT1G20925 AT1G76520 AT1G76530 | 3 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV6G16870 BV6G16890 | 2 | |
| Anchor point | 1-to-1 | BV6G06140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G16890 | 1 | ||
| Tree-based ortholog | 1-to-many | BV6G16890 BV6G16870 BV6G08960 | 3 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR02G23830 BR07G19570 BR07G31810 | 3 | |
| Anchor point | 1-to-1 | BR06G15130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR02G23830 BR07G31810 | 2 | ||
| Tree-based ortholog | 1-to-many | BR06G15130 BR07G19570 BR02G23830 ... | 4 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G19560 CRU_002G22120 | 2 | |
| Anchor point | 1-to-many | CRU_001G19560 CRU_002G22120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G19560 | 1 | ||
| Tree-based ortholog | 1-to-many | CRU_001G19560 CRU_002G22120 | 2 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP24967G00020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP24967G00020 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP24967G00020 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR16G09300 | 1 | |
| Tree-based ortholog | 1-to-many | CR13G00710 CR16G09300 | 2 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL11G12960 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G12960 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL11G12960 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00002G07220 | 1 | |
| Anchor point | 1-to-1 | CS00002G07220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00002G07220 | 1 | ||
| Tree-based ortholog | 1-to-many | CS00019G00570 CS00272G00150 | 2 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00029G04440 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00029G04440 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00029G04440 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0010G22260 EG0010G22270 | 2 | |
| Anchor point | 1-to-1 | EG0009G18470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0010G22270 EG0010G22260 | 2 | ||
| Tree-based ortholog | 1-to-many | EG0009G18470 EG0009G18480 EG0005G26000 ... | 6 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV5G28230 | 1 | |
| Anchor point | 1-to-1 | FV5G28230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G28230 | 1 | ||
| Tree-based ortholog | 1-to-many | FV5G28260 FV5G28230 FV5G28290 | 3 | ||
| Glycine max | Orthologous gene family | many-to-many | GM01G36030 GM09G32810 GM11G09390 ... | 4 | |
| Anchor point | 1-to-many | GM16G21852 GM01G36030 GM09G32810 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM09G32810 GM16G21930 | 2 | ||
| Tree-based ortholog | 1-to-many | GM10G33280 GM20G34371 GM20G34381 ... | 12 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR03G00090 | 1 | |
| Anchor point | 1-to-1 | GR03G00090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR03G00090 | 1 | ||
| Tree-based ortholog | 1-to-1 | GR03G00090 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G028190 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G028190 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ2G028190 | 1 | ||
| Malus domestica | Anchor point | 1-to-1 | MD17G021980 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G187700 MD15G016690 MD02G010140 | 3 | ||
| Tree-based ortholog | 1-to-1 | MD00G390250 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME02943G01360 ME06512G02270 ME07520G03720 | 3 | |
| Anchor point | 1-to-1 | ME02943G01360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06512G02270 | 1 | ||
| Tree-based ortholog | 1-to-1 | ME06512G02270 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT5G024970 MT8G072560 | 2 | |
| Anchor point | 1-to-many | MT5G024520 MT8G072560 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G072560 | 1 | ||
| Tree-based ortholog | 1-to-many | MT8G006775 MT8G006780 MT5G024960 ... | 5 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS09G31478 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G31478 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS09G31478 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL07G03300 | 1 | |
| Tree-based ortholog | 1-to-1 | OL07G03300 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00497G00060 PP00420G00070 | 2 | |
| Tree-based ortholog | 1-to-1 | PP00087G00560 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G45630 PT02G00350 | 2 | |
| Anchor point | 1-to-many | PT11G14560 PT02G00350 PT01G45620 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT01G45630 | 1 | ||
| Tree-based ortholog | 1-to-1 | PT01G45630 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_005G00420 PPE_005G00430 PPE_005G00440 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PPE_005G00440 PPE_005G00430 PPE_005G00420 | 3 | ||
| Tree-based ortholog | 1-to-many | PPE_005G00420 PPE_005G00430 PPE_005G00440 | 3 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29682G00120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29682G00120 | 1 | ||
| Tree-based ortholog | 1-to-many | RC29682G00100 RC29709G00520 RC29682G00120 | 3 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL04G082830 SL12G095750 | 2 | |
| Anchor point | 1-to-many | SL02G082450 SL04G082830 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G082830 | 1 | ||
| Tree-based ortholog | 1-to-many | SL03G031990 SL02G037550 | 2 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST04G036360 ST12G028090 | 2 | |
| Anchor point | 1-to-1 | ST04G036360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G036360 | 1 | ||
| Tree-based ortholog | 1-to-many | ST03G008640 ST02G008010 | 2 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G18630 TP5G31690 | 2 | |
| Anchor point | 1-to-many | TP1G18630 TP5G31680 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G18630 | 1 | ||
| Tree-based ortholog | 1-to-many | TP1G18630 TP5G31690 TP5G31680 | 3 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV04G04600 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV04G04600 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV04G04600 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM07G18010 ZM10G19730 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM10G19730 ZM07G18010 | 2 | ||
| Tree-based ortholog | 1-to-many | ZM07G18010 ZM10G19730 | 2 |