Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
ST09G031080
(Solanum tuberosum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum tuberosum | Orthologous gene family | ST09G031080 ST12G030720 | 2 |  |
| Best-Hits-and-Inparalogs(BHI)family | ST09G031080 | 1 | ||
| Tree-based ortholog | ST09G031080 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00022G00770 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00022G00770 | 1 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G05370 | 1 | |
| Tree-based ortholog | 1-to-1 | AL3G18180 | 1 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G05850 | 1 | |
| Tree-based ortholog | 1-to-1 | AT3G16920 | 1 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G17440 | 1 | |
| Tree-based ortholog | 1-to-1 | BV5G17440 | 1 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G01940 | 1 | |
| Tree-based ortholog | 1-to-many | BR10G01940 BR08G30770 | 2 | ||
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G04890 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_003G15880 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP34724G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | CP34724G00010 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G07220 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G16650 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL07G16650 | 1 | ||
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CS03710G00010 CS00204G00100 | 2 | |
| Tree-based ortholog | 1-to-1 | CS11832G00010 | 1 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00031G01460 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00031G01460 | 1 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G32560 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0008G03980 | 1 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G09090 | 1 | |
| Tree-based ortholog | 1-to-1 | FV4G09090 | 1 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM18G51980 GM08G29090 | 2 | |
| Tree-based ortholog | 1-to-many | GM15G15360 GM09G04330 | 2 | ||
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR11G19850 GR06G07890 | 2 | |
| Tree-based ortholog | 1-to-many | GR11G19850 GR06G07890 | 2 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G019300 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ6G019300 | 1 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD13G029070 MD00G435510 | 2 | |
| Tree-based ortholog | 1-to-many | MD00G074100 MD16G009970 MD00G369350 | 3 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04209G00540 | 1 | |
| Tree-based ortholog | 1-to-1 | ME04209G00540 | 1 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT7G021640 MT1G105535 | 2 | |
| Tree-based ortholog | 1-to-1 | MT2G034680 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G32080 | 1 | |
| Tree-based ortholog | 1-to-many | OS09G32080 OS08G41100 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00305G00070 PP00133G00180 PP00306G00090 | 3 | |
| Tree-based ortholog | 1-to-many | PP00133G00180 PP00306G00090 PP00305G00070 | 3 | ||
| Populus trichocarpa | Anchor point | N/A | PT14G14660 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT10G14160 | 1 | ||
| Tree-based ortholog | 1-to-1 | PT10G14160 | 1 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G17330 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_001G11520 | 1 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30098G00200 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29889G00330 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL09G098540 SL12G098810 | 2 | |
| Anchor point | N/A | SL09G098540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G098540 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL09G098540 | 1 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G04670 | 1 | |
| Tree-based ortholog | 1-to-1 | TP3G15160 | 1 | ||
| Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G00470 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0004G29700 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G10800 | 1 | |
| Tree-based ortholog | 1-to-1 | VV05G11840 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM07G18210 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM07G18210 | 1 |