Gene: AT3G16920 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G16920
Transcript Identifier
AT3G16920.1
Gene Type
Coding gene
Location
3 : 5776663-5777886 : negative

Family

Gene family
HOM03D000239
(447 genes in 29 species)
specific family
Subfamily
ORTHO03D015477
(12 genes in 10 species)
specific family

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Descriptions

Description
chitinase-like protein 2
Curated Summary
Encodes a chitinase-like protein expressed predominantly in stems. Mutants accumulate ligning in etiolated hypocotyls.
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Identifiers

Identifier Name
aliasCTL2
aliaschitinase-like protein 2
aliasATCTL2
uniprotQ9LSP9

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009408IMPGene Ontologyresponse to heat1
GO:0009651IMPGene Ontologyresponse to salt stress1
GO:0009809IMPGene Ontologylignin biosynthetic process1
GO:0010228RCAGene Ontologyvegetative to reproductive phase transition of meristem1
GO:0010413RCAGene Ontologyglucuronoxylan metabolic process1
GO:0016926RCAGene Ontologyprotein desumoylation1
GO:0045492RCAGene Ontologyxylan biosynthetic process1
GO:0050665RCAGene Ontologyhydrogen peroxide biosynthetic process1
GO:0006032IEAUniProtchitin catabolic process1 2 3
GO:0016998IEAUniProtcell wall macromolecule catabolic process1 2 3
GO:0005975IEAUniProtcarbohydrate metabolic process1 2 3
GO:0006807IEAPLAZA Homologynitrogen compound metabolic processHOM03D000239
GO:0006030IEAPLAZA Homologychitin metabolic processHOM03D000239
GO:1901575IEAPLAZA Homologyorganic substance catabolic processHOM03D000239
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03D000239
GO:0046348IEAPLAZA Homologyamino sugar catabolic processHOM03D000239
GO:0071554IEAPLAZA Homologycell wall organization or biogenesisHOM03D000239
GO:0043170IEAPLAZA Homologymacromolecule metabolic processHOM03D000239
GO:1901565IEAPLAZA Homologyorganonitrogen compound catabolic processHOM03D000239
GO:1901564IEAPLAZA Homologyorganonitrogen compound metabolic processHOM03D000239
GO:0044036IEAPLAZA Homologycell wall macromolecule metabolic processHOM03D000239
GO:0006040IEAPLAZA Homologyamino sugar metabolic processHOM03D000239
GO:0006026IEAPLAZA Homologyaminoglycan catabolic processHOM03D000239
GO:1901136IEAPLAZA Homologycarbohydrate derivative catabolic processHOM03D000239
GO:0009056IEAPLAZA Homologycatabolic processHOM03D000239
GO:1901135IEAPLAZA Homologycarbohydrate derivative metabolic processHOM03D000239
GO:0009057IEAPLAZA Homologymacromolecule catabolic processHOM03D000239
GO:0006022IEAPLAZA Homologyaminoglycan metabolic processHOM03D000239
GO:1901072IEAPLAZA Homologyglucosamine-containing compound catabolic processHOM03D000239
GO:1901071IEAPLAZA Homologyglucosamine-containing compound metabolic processHOM03D000239
GO:0044248IEAPLAZA Homologycellular catabolic processHOM03D000239

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004568ISS, IEAGene Ontologychitinase activity1
GO:0004553IEAPLAZA Homologyhydrolase activity, hydrolyzing O-glycosyl compoundsHOM03D000239
GO:0016798IEAPLAZA Homologyhydrolase activity, acting on glycosyl bondsHOM03D000239
GO:0008061IEAPLAZA Homologychitin bindingHOM03D000239
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000239

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576IEA, ISMUniProtextracellular region1 2 3 4
GO:0005886IDAGene Ontologyplasma membrane1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000726Glycoside hydrolase, family 19, catalytic
IPR023346Lysozyme-like domain

Mapman id Description
20.1stress.biotic
No SignalP domains detected for this gene.