Integrative Orthology Viewer: SL03G045020 (Solanum lycopersicum)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Solanum lycopersicum | Orthologous gene family | SL03G044120 SL03G045020 SL07G054280 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | SL03G045020 | 1 | ||
Tree-based ortholog | SL03G045020 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00024G00850 ATR_00039G01370 ATR_00092G00230 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00092G00230 ATR_00092G00250 | 2 | ||
Tree-based ortholog | 1-to-many | ATR_00092G00230 ATR_00092G00250 ATR_00024G02440 | 3 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G41150 AL7G13110 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G41150 | 1 | ||
Tree-based ortholog | 1-to-many | AL7G13110 AL3G41150 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G20340 AT4G28680 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G20340 | 1 | ||
Tree-based ortholog | 1-to-many | AT4G28680 AT2G20340 | 2 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G27220 BV2G10180 BV7G00250 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G27220 | 1 | ||
Tree-based ortholog | 1-to-1 | BV0G27220 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G08470 BR07G00390 BR07G00400 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR09G45310 BR09G10570 | 2 | ||
Tree-based ortholog | 1-to-many | BR01G08470 BR07G00400 BR07G00390 ... | 6 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_003G33360 CRU_003G33370 CRU_003G33380 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CRU_003G33380 CRU_003G33370 | 2 | ||
Tree-based ortholog | 1-to-many | CRU_007G11300 CRU_003G33370 CRU_003G33380 ... | 4 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00034G00630 CP00051G00680 CP00087G00370 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP28458G00010 | 1 | ||
Tree-based ortholog | 1-to-1 | CP28458G00010 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR01G06240 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G06240 | 1 | ||
Tree-based ortholog | 1-to-1 | CR01G06240 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL03G06210 CL07G01580 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G06210 | 1 | ||
Tree-based ortholog | 1-to-1 | CL03G06210 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00002G02360 CS00010G00750 CS00054G00200 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CS03678G00010 CS00010G00750 | 2 | ||
Tree-based ortholog | 1-to-many | CS03678G00010 CS03485G00020 CS01165G00040 ... | 6 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00018G00570 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00018G00570 | 1 | ||
Tree-based ortholog | 1-to-1 | CM00001G09030 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G14540 EG0005G14570 EG0005G14580 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0005G18990 EG0005G19010 EG0005G14570 ... | 4 | ||
Tree-based ortholog | 1-to-many | EG0005G14570 EG0005G14760 EG0005G14580 ... | 6 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV2G10380 FV3G16050 FV3G16060 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G16060 | 1 | ||
Tree-based ortholog | 1-to-many | FV2G26810 FV2G26790 FV2G11850 ... | 6 | ||
Glycine max | Orthologous gene family | many-to-many | GM03G32510 GM07G06500 GM09G02530 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM07G06500 | 1 | ||
Tree-based ortholog | 1-to-many | GM07G06500 GM15G13430 GM09G02530 | 3 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G08070 GR01G18250 GR02G01690 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR11G21100 GR11G21120 | 2 | ||
Tree-based ortholog | 1-to-many | GR11G21120 GR11G21100 | 2 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G062670 LJ3G033840 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G033840 | 1 | ||
Tree-based ortholog | 1-to-1 | LJ3G033840 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G069170 MD00G378960 MD11G014350 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD11G014350 | 1 | ||
Tree-based ortholog | 1-to-many | MD00G378960 MD00G069170 MD11G014350 ... | 6 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME12693G00030 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME12693G00030 | 1 | ||
Tree-based ortholog | 1-to-many | ME06825G00540 ME12693G00030 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT2G029430 MT2G029450 MT7G058700 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT7G058700 MT2G029450 MT2G029430 | 3 | ||
Tree-based ortholog | 1-to-many | MT8G028060 MT2G029450 MT2G029430 ... | 4 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G56380 OS05G43510 OS07G25590 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS10G26110 | 1 | ||
Tree-based ortholog | 1-to-many | OS05G43510 OS10G23900 OS01G56380 | 3 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL02G01420 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL02G01420 | 1 | ||
Tree-based ortholog | 1-to-1 | OL02G01420 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00102G00180 PP00102G00200 PP00102G00240 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00102G00260 PP00102G00180 PP00102G00240 ... | 4 | ||
Tree-based ortholog | 1-to-many | PP00102G00180 PP00102G00200 PP00102G00240 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT02G25560 PT04G03620 PT13G05280 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT04G03620 | 1 | ||
Tree-based ortholog | 1-to-1 | PT04G03620 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_003G20770 PPE_004G08240 PPE_004G08250 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PPE_004G08240 PPE_006G21010 PPE_004G08250 ... | 5 | ||
Tree-based ortholog | 1-to-many | PPE_006G21010 PPE_004G08250 PPE_004G08280 ... | 5 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29637G00030 RC29950G00630 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29637G00030 | 1 | ||
Tree-based ortholog | 1-to-many | RC29637G00030 RC28725G00010 RC60499G00010 ... | 4 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST03G010370 ST07G019860 ST07G019870 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ST08G012000 ST12G011020 | 2 | ||
Tree-based ortholog | 1-to-many | ST12G011020 ST08G012000 | 2 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP3G33580 TP7G26650 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G33580 | 1 | ||
Tree-based ortholog | 1-to-many | TP7G26650 TP3G33580 | 2 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G24700 TC0002G00890 TC0002G00910 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TC0002G00910 TC0002G00890 | 2 | ||
Tree-based ortholog | 1-to-many | TC0002G00910 TC0002G00890 | 2 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV04G04340 VV04G04350 VV07G11790 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G11790 | 1 | ||
Tree-based ortholog | 1-to-many | VV10G04940 VV10G04950 | 2 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G05910 ZM01G05930 ZM01G44860 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G44860 | 1 | ||
Tree-based ortholog | 1-to-many | ZM06G28220 ZM01G05930 ZM01G05910 | 3 |