Integrative Orthology Viewer: PT18G08740 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT01G23190 PT01G23250 PT09G02510 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | PT01G23250 PT01G23190 PT18G08740 | 3 | ||
Tree-based ortholog | PT01G23250 PT01G23190 PT00G08460 ... | 5 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00039G01090 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00068G00810 | 1 | ||
Tree-based ortholog | many-to-1 | ATR_00068G00810 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G03420 AL3G03930 AL6G18540 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL4G31940 | 1 | ||
Tree-based ortholog | many-to-many | AL4G31940 AL3G00250 AL3G00240 ... | 4 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G04090 AT3G04350 AT5G18490 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G44260 | 1 | ||
Tree-based ortholog | many-to-many | AT2G44230 AT3G01870 AT3G01880 ... | 4 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV2G05880 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV4G11200 | 1 | ||
Tree-based ortholog | many-to-1 | BV4G11200 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR00G07080 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR04G26460 | 1 | ||
Tree-based ortholog | many-to-many | BR05G04070 BR00G07740 BR03G28300 ... | 7 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G03000 CRU_003G03390 CRU_006G16350 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_004G25880 | 1 | ||
Tree-based ortholog | many-to-many | CRU_004G25840 CRU_003G00190 CRU_004G25880 | 3 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP01155G00010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00228G00220 | 1 | ||
Tree-based ortholog | many-to-1 | CP00228G00220 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR10G04420 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR10G04420 | 1 | ||
Tree-based ortholog | many-to-1 | CR10G04420 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL03G09480 CL06G01450 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL10G10940 | 1 | ||
Tree-based ortholog | many-to-many | CL10G10950 CL10G10940 | 2 | ||
Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00356G00030 | 1 | |
Tree-based ortholog | many-to-1 | CS00356G00030 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00012G01500 CM00052G01730 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00064G00080 | 1 | ||
Tree-based ortholog | many-to-many | CM00064G00080 CM00064G00090 | 2 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0004G18230 EG0005G02240 EG0008G34210 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0004G18230 | 1 | ||
Tree-based ortholog | many-to-many | EG0009G23580 EG0005G02240 EG0004G18230 | 3 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G26840 FV2G10190 FV6G20760 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV6G20760 | 1 | ||
Tree-based ortholog | many-to-1 | FV6G20760 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM08G17410 GM15G41700 GM15G42160 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM15G41700 GM08G17410 | 2 | ||
Tree-based ortholog | many-to-many | GM08G16940 GM15G42170 GM08G17410 ... | 8 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR04G05750 GR07G14990 GR07G27400 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR09G42970 | 1 | ||
Tree-based ortholog | many-to-many | GR09G42960 GR09G42970 GR07G33670 | 3 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G037630 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ2G037630 | 1 | ||
Tree-based ortholog | many-to-many | LJ2G037630 LJ3G049930 | 2 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G209550 MD00G213750 MD04G018970 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD07G000070 | 1 | ||
Tree-based ortholog | many-to-many | MD08G010730 MD07G000070 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME01508G00050 ME11106G00010 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME01508G00050 ME11106G00010 | 2 | ||
Tree-based ortholog | many-to-many | ME11106G00010 ME01508G00050 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G080370 MT1G080410 MT4G077620 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT2G067640 | 1 | ||
Tree-based ortholog | many-to-many | MT2G062340 MT2G067640 MT2G062370 ... | 7 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G04930 OS03G51150 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS07G38840 | 1 | ||
Tree-based ortholog | many-to-1 | OS07G38840 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00199G00790 PP00318G00130 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00318G00130 PP00199G00790 | 2 | ||
Tree-based ortholog | many-to-many | PP00318G00130 PP00199G00790 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_002G08190 PPE_006G35510 PPE_008G22770 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PPE_008G22770 PPE_002G08190 | 2 | ||
Tree-based ortholog | many-to-many | PPE_002G08190 PPE_008G22770 | 2 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29637G00140 RC29680G00560 RC30115G00270 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30115G00270 | 1 | ||
Tree-based ortholog | many-to-1 | RC30115G00270 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL04G050140 SL05G055910 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G081620 | 1 | ||
Tree-based ortholog | many-to-1 | SL08G075790 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G027500 ST04G019080 ST05G029100 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G027500 | 1 | ||
Tree-based ortholog | many-to-1 | ST08G020810 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G02910 TP2G08770 TP3G03250 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP4G26330 | 1 | ||
Tree-based ortholog | many-to-many | TP4G26310 TP3G00200 TP2G18770 ... | 4 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G24860 TC0005G26670 TC0007G17060 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0007G17060 | 1 | ||
Tree-based ortholog | many-to-1 | TC0007G17060 | 1 | ||
Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV13G01490 | 1 | |
Tree-based ortholog | many-to-1 | VV13G01490 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G03240 ZM05G05230 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM07G25210 | 1 | ||
Tree-based ortholog | many-to-1 | ZM07G25210 | 1 |