Integrative Orthology Viewer: PT16G06610 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT06G19980 PT08G01330 PT16G06610 | 3 | |
Anchor point | PT06G19980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT06G19980 PT16G06610 | 2 | ||
Tree-based ortholog | PT06G19980 PT16G06610 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00004G01650 | 1 | |
Anchor point | 1-to-1 | ATR_00004G01650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00004G01650 | 1 | ||
Tree-based ortholog | many-to-1 | ATR_00004G01650 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G46180 AL4G21270 AL5G22130 | 3 | |
Anchor point | 1-to-1 | AL4G21270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL4G21270 | 1 | ||
Tree-based ortholog | many-to-many | AL4G21270 AL1G46180 AL5G22130 | 3 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G51420 AT2G35840 AT3G52340 | 3 | |
Anchor point | 1-to-1 | AT2G35840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G35840 | 1 | ||
Tree-based ortholog | many-to-many | AT2G35840 AT1G51420 AT3G52340 | 3 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV5G20010 | 1 | |
Anchor point | 1-to-1 | BV5G20010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV5G20010 | 1 | ||
Tree-based ortholog | many-to-1 | BV5G20010 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G17650 BR04G05850 BR04G21310 ... | 5 | |
Anchor point | 1-to-1 | BR03G17650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR04G21310 | 1 | ||
Tree-based ortholog | many-to-many | BR03G17650 BR04G21310 BR09G26890 ... | 6 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G38400 CRU_004G17020 CRU_005G17550 ... | 4 | |
Anchor point | 1-to-many | CRU_005G17550 CRU_004G17020 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_001G38400 | 1 | ||
Tree-based ortholog | many-to-many | CRU_004G17020 CRU_001G38400 CRU_005G17550 | 3 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00036G00920 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00036G00920 | 1 | ||
Tree-based ortholog | many-to-1 | CP00036G00920 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-many | CR00G00450 CR06G09770 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR07G08540 | 1 | ||
Tree-based ortholog | many-to-many | CR06G09770 CR00G00450 CR07G08540 | 3 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL05G23120 CL10G16070 | 2 | |
Anchor point | 1-to-1 | CL10G16070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL10G16070 | 1 | ||
Tree-based ortholog | many-to-1 | CL10G16070 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00018G01370 | 1 | |
Anchor point | 1-to-1 | CS00018G01370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00018G01370 | 1 | ||
Tree-based ortholog | many-to-1 | CS00018G01370 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00011G05060 | 1 | |
Anchor point | 1-to-1 | CM00011G05060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00011G05060 | 1 | ||
Tree-based ortholog | many-to-1 | CM00011G05060 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0001G21440 | 1 | |
Anchor point | 1-to-1 | EG0001G21440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0001G21440 | 1 | ||
Tree-based ortholog | many-to-1 | EG0001G21440 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV6G28390 | 1 | |
Anchor point | 1-to-1 | FV6G28390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV6G28390 | 1 | ||
Tree-based ortholog | many-to-1 | FV6G28390 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM10G10960 GM20G16990 | 2 | |
Anchor point | 1-to-1 | GM10G10960 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GM10G10960 | 1 | ||
Tree-based ortholog | many-to-1 | GM10G10960 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR09G30190 GR09G39530 | 2 | |
Anchor point | 1-to-1 | GR09G39530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR09G39530 | 1 | ||
Tree-based ortholog | many-to-1 | GR09G39530 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD02G024690 | 1 | |
Anchor point | 1-to-1 | MD14G004200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD02G024690 | 1 | ||
Tree-based ortholog | many-to-1 | MD14G004200 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02892G01080 ME08542G00570 | 2 | |
Anchor point | 1-to-many | ME02892G01080 ME08542G00570 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME08542G00570 ME02892G01080 | 2 | ||
Tree-based ortholog | many-to-many | ME08542G00570 ME02892G01080 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G040560 MT1G054980 | 2 | |
Anchor point | 1-to-1 | MT1G054980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT1G054980 | 1 | ||
Tree-based ortholog | many-to-1 | MT1G054980 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G27880 OS02G05030 OS05G05270 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | OS02G05030 OS01G27880 | 2 | ||
Tree-based ortholog | many-to-many | OS05G05270 OS01G27880 OS02G05030 | 3 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL01G03030 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL01G03030 | 1 | ||
Tree-based ortholog | many-to-1 | OL01G03030 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00058G01230 PP00150G00410 PP00162G00480 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00162G00480 PP00292G00020 PP00150G00410 ... | 4 | ||
Tree-based ortholog | many-to-many | PP00150G00410 PP00058G01230 PP00292G00020 ... | 5 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_005G00200 | 1 | |
Anchor point | 1-to-1 | PPE_007G11130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_007G11130 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_007G11130 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29333G00460 | 1 | |
Anchor point | 1-to-1 | RC29333G00460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29333G00460 | 1 | ||
Tree-based ortholog | many-to-1 | RC29333G00460 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G006740 SL10G081660 | 2 | |
Anchor point | 1-to-many | SL10G081660 SL01G006740 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL10G081660 | 1 | ||
Tree-based ortholog | many-to-many | SL10G081660 SL01G006740 | 2 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G007310 ST10G026460 | 2 | |
Anchor point | 1-to-many | ST01G007310 ST10G026460 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST10G026460 | 1 | ||
Tree-based ortholog | many-to-many | ST10G026460 ST01G007310 | 2 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G38100 TP4G18100 TP5G09940 | 3 | |
Anchor point | 1-to-1 | TP5G09940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP4G18100 | 1 | ||
Tree-based ortholog | many-to-many | TP4G18100 TP1G38100 TP5G09940 | 3 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0010G12140 | 1 | |
Anchor point | 1-to-1 | TC0005G10850 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0005G10850 | 1 | ||
Tree-based ortholog | many-to-1 | TC0005G10850 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV08G01180 VV12G08570 | 2 | |
Anchor point | 1-to-1 | VV08G01180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV08G01180 VV12G08570 | 2 | ||
Tree-based ortholog | many-to-many | VV12G08570 VV08G01180 | 2 | ||
Zea mays | Orthologous gene family | many-to-many | ZM08G17540 ZM10G12270 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM08G17540 | 1 | ||
Tree-based ortholog | many-to-many | ZM10G12270 ZM08G17540 | 2 |