Integrative Orthology Viewer: PT10G23220 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT08G02930 PT10G23220 | 2 | |
Anchor point | PT08G02930 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT10G23220 PT08G02930 | 2 | ||
Tree-based ortholog | PT10G23220 PT08G02930 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00050G00230 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00050G00230 | 1 | ||
Tree-based ortholog | many-to-1 | ATR_00050G00230 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL5G21930 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL5G21930 | 1 | ||
Tree-based ortholog | many-to-1 | AL5G21930 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G52180 | 1 | |
Anchor point | 1-to-1 | AT3G52180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G52180 | 1 | ||
Tree-based ortholog | many-to-1 | AT3G52180 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G07840 | 1 | |
Anchor point | 1-to-1 | BV0G07840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV0G07840 | 1 | ||
Tree-based ortholog | many-to-1 | BV0G07840 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR04G05920 BR09G33760 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR04G05920 | 1 | ||
Tree-based ortholog | many-to-many | BR04G05920 BR09G33730 BR09G33760 | 3 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_005G17410 | 1 | |
Anchor point | 1-to-1 | CRU_005G17410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_005G17410 | 1 | ||
Tree-based ortholog | many-to-1 | CRU_005G17410 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00128G00700 | 1 | |
Anchor point | 1-to-1 | CP00128G00700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00128G00700 | 1 | ||
Tree-based ortholog | many-to-1 | CP00128G00700 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR03G02210 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR03G02210 | 1 | ||
Tree-based ortholog | many-to-1 | CR03G02210 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G22570 | 1 | |
Anchor point | 1-to-1 | CL05G22570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL05G22570 | 1 | ||
Tree-based ortholog | many-to-1 | CL05G22570 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00398G00010 | 1 | |
Anchor point | 1-to-1 | CS00398G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00398G00010 | 1 | ||
Tree-based ortholog | many-to-1 | CS00398G00010 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00016G07220 | 1 | |
Anchor point | 1-to-1 | CM00016G07220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00016G07220 | 1 | ||
Tree-based ortholog | many-to-1 | CM00016G07220 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0007G21410 | 1 | |
Anchor point | 1-to-1 | EG0007G21410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0007G21410 | 1 | ||
Tree-based ortholog | many-to-1 | EG0007G21410 | 1 | ||
Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV7G17720 | 1 | |
Tree-based ortholog | many-to-1 | FV7G30850 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM10G34370 GM20G33190 | 2 | |
Anchor point | 1-to-many | GM20G33190 GM10G34370 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM20G33190 GM10G34370 | 2 | ||
Tree-based ortholog | many-to-many | GM20G33190 GM10G34370 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR12G02520 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR12G02520 | 1 | ||
Tree-based ortholog | many-to-1 | GR12G02520 | 1 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ1G016960 | 1 | |
Tree-based ortholog | many-to-1 | LJ1G016960 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD15G023760 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD15G023760 | 1 | ||
Tree-based ortholog | many-to-many | MD11G014470 MD00G297920 MD15G023760 | 3 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME07413G00050 | 1 | |
Anchor point | 1-to-1 | ME07413G00050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME07413G00050 | 1 | ||
Tree-based ortholog | many-to-many | ME07413G00050 ME11232G00140 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT1G090867 | 1 | |
Anchor point | 1-to-1 | MT1G090867 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT1G090867 | 1 | ||
Tree-based ortholog | many-to-1 | MT1G090867 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G01750 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G01750 | 1 | ||
Tree-based ortholog | many-to-1 | OS03G01750 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-many | OL02G00870 OL02G00860 | 2 | |
Tree-based ortholog | many-to-many | OL13G02730 OL21G00270 | 2 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00014G00940 PP00144G00150 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00014G00940 PP00144G00150 | 2 | ||
Tree-based ortholog | many-to-many | PP00144G00150 PP00014G00940 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_002G09620 | 1 | |
Anchor point | 1-to-1 | PPE_002G09620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_002G09620 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_002G09620 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC27916G00030 | 1 | |
Anchor point | 1-to-1 | RC27916G00030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC27916G00030 | 1 | ||
Tree-based ortholog | many-to-1 | RC27916G00030 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G111160 SL11G007830 | 2 | |
Anchor point | 1-to-1 | SL11G007830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL11G007830 | 1 | ||
Tree-based ortholog | many-to-many | SL03G111160 SL11G007830 | 2 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST03G023920 ST11G010680 | 2 | |
Anchor point | 1-to-1 | ST11G010680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST11G010680 | 1 | ||
Tree-based ortholog | many-to-many | ST03G023920 ST11G010680 | 2 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP5G10090 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G10090 | 1 | ||
Tree-based ortholog | many-to-1 | TP5G10090 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0010G08720 | 1 | |
Anchor point | 1-to-1 | TC0010G08720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0010G08720 | 1 | ||
Tree-based ortholog | many-to-1 | TC0010G08720 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV00G11410 | 1 | |
Anchor point | 1-to-1 | VV00G11410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV00G11410 | 1 | ||
Tree-based ortholog | many-to-1 | VV00G11410 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM01G00610 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G00610 | 1 | ||
Tree-based ortholog | many-to-1 | ZM01G00610 | 1 |