Integrative Orthology Viewer: PT10G15760 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT08G09700 PT10G15760 | 2 | |
Anchor point | PT17G09520 PT15G05910 PT08G09700 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | PT10G15760 PT08G09700 | 2 | ||
Tree-based ortholog | PT10G15760 PT08G09700 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00001G02190 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00047G01910 | 1 | ||
Tree-based ortholog | many-to-1 | ATR_00001G02190 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL2G17480 | 1 | |
Anchor point | many-to-many | AL5G03320 AL3G01260 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL2G17480 | 1 | ||
Tree-based ortholog | many-to-1 | AL2G17480 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G26355 AT1G69230 | 2 | |
Anchor point | many-to-many | AT1G26355 AT1G69230 AT2G03680 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G26355 | 1 | ||
Tree-based ortholog | many-to-many | AT1G26355 AT1G69230 | 2 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV6G14150 | 1 | |
Anchor point | many-to-1 | BV6G14150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV6G14150 | 1 | ||
Tree-based ortholog | many-to-1 | BV6G14150 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR02G19690 | 1 | |
Anchor point | many-to-many | BR06G34400 BR02G19690 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR02G19690 | 1 | ||
Tree-based ortholog | many-to-1 | BR02G19690 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_002G14860 | 1 | |
Anchor point | many-to-many | CRU_005G02610 CRU_003G01230 CRU_002G14860 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_002G14860 | 1 | ||
Tree-based ortholog | many-to-1 | CRU_002G14860 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00001G01370 | 1 | |
Anchor point | many-to-1 | CP00001G01370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00001G01370 | 1 | ||
Tree-based ortholog | many-to-many | CP00001G01370 CP00285G00040 | 2 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR09G06660 | 1 | |
Tree-based ortholog | many-to-1 | CR09G06660 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL08G10170 | 1 | |
Anchor point | many-to-1 | CL08G10170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL08G10170 | 1 | ||
Tree-based ortholog | many-to-1 | CL08G10170 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00019G01950 | 1 | |
Anchor point | many-to-1 | CS00019G01950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00019G01950 | 1 | ||
Tree-based ortholog | many-to-1 | CS00019G01950 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00014G07900 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00014G07900 | 1 | ||
Tree-based ortholog | many-to-1 | CM00014G07900 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G05310 EG0002G25790 | 2 | |
Anchor point | many-to-many | EG0002G25790 EG0002G05310 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0002G25790 | 1 | ||
Tree-based ortholog | many-to-1 | EG0002G25790 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV0G03930 | 1 | |
Anchor point | many-to-many | FV0G03930 FV5G11890 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV0G03930 | 1 | ||
Tree-based ortholog | many-to-1 | FV0G03930 | 1 | ||
Glycine max | Anchor point | many-to-many | GM02G13180 GM01G07554 GM13G06390 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM19G03961 GM13G06390 | 2 | ||
Tree-based ortholog | many-to-many | GM13G06390 GM19G03961 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR13G09490 | 1 | |
Anchor point | many-to-many | GR03G10200 GR05G14580 GR13G09490 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR13G09490 | 1 | ||
Tree-based ortholog | many-to-many | GR13G09490 GR05G14580 | 2 | ||
Malus domestica | Anchor point | many-to-1 | MD06G016780 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD09G004940 | 1 | ||
Tree-based ortholog | many-to-many | MD00G040240 MD00G470460 MD00G210940 | 3 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME00109G00330 ME04489G00130 | 2 | |
Anchor point | many-to-many | ME06656G00990 ME08359G01530 ME04043G01980 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME00109G00330 | 1 | ||
Tree-based ortholog | many-to-many | ME00109G00330 ME04489G00130 | 2 | ||
Medicago truncatula | Anchor point | many-to-1 | MT5G045310 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MT7G024310 MT6G015390 | 2 | ||
Tree-based ortholog | many-to-1 | MT6G015390 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G30430 OS12G31780 | 2 | |
Anchor point | many-to-1 | OS03G30430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS12G31780 | 1 | ||
Tree-based ortholog | many-to-1 | OS11G41150 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00124G00080 | 1 | |
Tree-based ortholog | many-to-1 | PP00124G00080 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_001G30030 | 1 | |
Anchor point | many-to-many | PPE_005G21020 PPE_003G23140 PPE_001G30030 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_001G30030 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_001G30030 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30174G04880 | 1 | |
Anchor point | many-to-many | RC30138G01240 RC30174G04880 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30174G04880 | 1 | ||
Tree-based ortholog | many-to-1 | RC30174G04880 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL05G012160 | 1 | |
Anchor point | many-to-many | SL01G010270 SL05G012160 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL05G012160 | 1 | ||
Tree-based ortholog | many-to-many | SL05G012160 SL01G010270 | 2 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST05G005860 | 1 | |
Anchor point | many-to-many | ST03G028500 ST05G005860 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST05G005860 | 1 | ||
Tree-based ortholog | many-to-1 | ST05G005860 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G22340 TP5G24280 | 2 | |
Anchor point | many-to-many | TP1G22340 TP2G14500 TP5G24280 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP1G22340 | 1 | ||
Tree-based ortholog | many-to-many | TP1G22340 TP5G24280 | 2 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0002G32830 | 1 | |
Anchor point | many-to-1 | TC0002G32830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0004G10230 | 1 | ||
Tree-based ortholog | many-to-1 | TC0002G32830 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV01G00170 VV01G10560 | 2 | |
Anchor point | many-to-many | VV01G10560 VV17G04670 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV01G00170 | 1 | ||
Tree-based ortholog | many-to-many | VV14G12980 VV01G10560 | 2 | ||
Zea mays | Orthologous gene family | many-to-many | ZM09G19590 ZM10G04140 | 2 | |
Anchor point | many-to-1 | ZM01G18230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM04G01810 | 1 | ||
Tree-based ortholog | many-to-1 | ZM04G01810 | 1 |