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Integrative Orthology Viewer:
PT08G04350
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT06G13120 PT08G04350 | 2 |  |
| Best-Hits-and-Inparalogs(BHI)family | PT08G04350 | 1 | ||
| Tree-based ortholog | PT08G04350 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00014G01210 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00014G01210 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00014G01210 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL4G21230 | 1 | |
| Anchor point | N/A | AL6G02140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G21230 | 1 | ||
| Tree-based ortholog | 1-to-1 | AL4G21230 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT2G35795 | 1 | |
| Anchor point | N/A | AT3G09700 AT5G03030 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G35795 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT2G35795 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV0G31900 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G31900 | 1 | ||
| Tree-based ortholog | 1-to-many | BV0G31900 BV6G24000 BV7G01000 | 3 | ||
| Brassica rapa | Orthologous gene family | many-to-1 | BR03G17620 | 1 | |
| Anchor point | N/A | BR02G03120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G17620 | 1 | ||
| Tree-based ortholog | 1-to-1 | BR03G17620 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_004G16980 | 1 | |
| Anchor point | N/A | CRU_006G01780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G16980 | 1 | ||
| Tree-based ortholog | 1-to-1 | CRU_004G16980 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00053G00300 CP00054G00490 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00054G00490 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00053G00300 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR09G07280 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR09G07280 | 1 | ||
| Tree-based ortholog | 1-to-1 | CR09G07280 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL04G08670 | 1 | |
| Anchor point | N/A | CL05G21970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G08670 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL05G21970 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00115G00200 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS09142G00010 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS09142G00010 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00022G00630 | 1 | |
| Anchor point | N/A | CM00016G07890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00022G00630 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00016G07890 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G09500 EG0008G05160 | 2 | |
| Anchor point | N/A | EG0001G09500 EG0007G22120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G05160 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0007G22120 | 1 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G24430 | 1 | |
| Tree-based ortholog | 1-to-1 | FV6G48240 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM05G16850 GM10G05710 GM13G20060 | 3 | |
| Anchor point | N/A | GM10G05710 GM17G23760 GM13G20060 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM05G16850 | 1 | ||
| Tree-based ortholog | 1-to-many | GM17G23760 GM05G16850 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR02G24980 GR12G09400 | 2 | |
| Anchor point | N/A | GR02G24980 GR12G09400 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR12G09400 | 1 | ||
| Tree-based ortholog | 1-to-1 | GR12G09400 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ3G011890 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G011890 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ3G011890 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD00G143890 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G143890 | 1 | ||
| Tree-based ortholog | 1-to-many | MD00G440000 MD00G120040 MD00G143890 | 3 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME06916G01540 ME11236G00090 | 2 | |
| Anchor point | N/A | ME11236G00090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME11236G00090 | 1 | ||
| Tree-based ortholog | 1-to-1 | ME11236G00090 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT7G117745 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G117745 | 1 | ||
| Tree-based ortholog | 1-to-many | MT7G117745 MT1G066810 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS07G09450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G09450 | 1 | ||
| Tree-based ortholog | 1-to-many | OS07G09450 OS01G06454 | 2 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL05G00680 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL05G00680 | 1 | ||
| Tree-based ortholog | 1-to-1 | OL05G00680 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-1 | PP00157G00410 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00157G00410 | 1 | ||
| Tree-based ortholog | 1-to-1 | PP00157G00410 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_002G21070 PPE_006G24900 | 2 | |
| Anchor point | N/A | PPE_006G24900 PPE_002G21070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G21070 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_002G21070 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29740G00140 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29740G00140 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC29740G00140 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL10G086040 | 1 | |
| Anchor point | N/A | SL09G007390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G086040 | 1 | ||
| Tree-based ortholog | 1-to-many | SL09G007390 SL10G086040 | 2 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST10G028710 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G028710 | 1 | ||
| Tree-based ortholog | 1-to-many | ST09G006970 ST10G028710 | 2 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP4G18060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G18060 | 1 | ||
| Tree-based ortholog | 1-to-1 | TP4G18060 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G05250 | 1 | |
| Anchor point | N/A | TC0010G06530 TC0005G05250 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G05250 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0010G06530 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV08G02480 VV17G09960 | 2 | |
| Anchor point | N/A | VV08G02480 VV13G03530 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G09960 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV13G03530 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM03G04510 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G04510 | 1 | ||
| Tree-based ortholog | 1-to-many | ZM10G07100 ZM03G04510 | 2 |