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Integrative Orthology Viewer:
PT06G04030
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT06G04030 PT16G03570 | 2 |  |
| Anchor point | PT16G03570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT16G03570 PT06G04030 | 2 | ||
| Tree-based ortholog | PT16G03570 PT06G04030 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00101G01330 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00101G01330 | 1 | ||
| Tree-based ortholog | many-to-1 | ATR_00101G01330 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL3G22480 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL3G22480 | 1 | ||
| Tree-based ortholog | many-to-1 | AL7G24090 | 1 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G18593 | 1 | |
| Tree-based ortholog | many-to-1 | AT4G18593 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV3G12950 | 1 | |
| Anchor point | 1-to-1 | BV3G12950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV3G12950 | 1 | ||
| Tree-based ortholog | many-to-1 | BV3G12950 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-1 | BR09G48350 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR09G48350 | 1 | ||
| Tree-based ortholog | many-to-1 | BR01G09720 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_006G03070 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_006G03070 | 1 | ||
| Tree-based ortholog | many-to-1 | CRU_007G21610 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00092G00800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00092G00800 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00092G00800 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR07G00520 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR07G00520 | 1 | ||
| Tree-based ortholog | many-to-1 | CR07G00520 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL10G11790 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL10G11790 | 1 | ||
| Tree-based ortholog | many-to-1 | CL10G11790 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00138G00130 | 1 | |
| Anchor point | 1-to-1 | CS00138G00130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00138G00130 | 1 | ||
| Tree-based ortholog | many-to-1 | CS00138G00130 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00098G00260 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00098G00260 | 1 | ||
| Tree-based ortholog | many-to-1 | CM00098G00260 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0001G18630 | 1 | |
| Anchor point | 1-to-1 | EG0001G18630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0001G18630 | 1 | ||
| Tree-based ortholog | many-to-1 | EG0001G18630 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV7G18270 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV7G18270 | 1 | ||
| Tree-based ortholog | many-to-1 | FV7G18270 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM03G28180 GM19G30950 | 2 | |
| Anchor point | 1-to-many | GM03G28180 GM19G30950 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM03G28180 GM19G30950 | 2 | ||
| Tree-based ortholog | many-to-many | GM03G28180 GM19G30950 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR07G35240 | 1 | |
| Anchor point | 1-to-1 | GR07G35240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR07G35240 | 1 | ||
| Tree-based ortholog | many-to-1 | GR07G35240 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ1G046880 | 1 | |
| Tree-based ortholog | many-to-1 | LJ1G046880 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G131450 MD12G008630 | 2 | |
| Anchor point | 1-to-1 | MD12G008630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD00G131450 | 1 | ||
| Tree-based ortholog | many-to-many | MD12G008630 MD05G000060 MD00G131450 | 3 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME09761G00120 | 1 | |
| Anchor point | 1-to-1 | ME09761G00120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME09761G00120 | 1 | ||
| Tree-based ortholog | many-to-1 | ME09761G00120 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT7G089540 | 1 | |
| Anchor point | 1-to-1 | MT7G089540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT7G089540 | 1 | ||
| Tree-based ortholog | many-to-1 | MT7G089540 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS11G04180 OS12G03990 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | OS11G04180 OS12G03990 | 2 | ||
| Tree-based ortholog | many-to-many | OS11G04180 OS12G03990 | 2 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL11G02880 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL11G02880 | 1 | ||
| Tree-based ortholog | many-to-1 | OL11G02880 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00121G00650 PP00192G00310 PP00210G00440 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00121G00650 | 1 | ||
| Tree-based ortholog | many-to-many | PP00121G00650 PP00192G00310 PP00210G00440 | 3 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_007G04560 PPE_007G04580 | 2 | |
| Anchor point | 1-to-1 | PPE_007G04560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_007G04560 | 1 | ||
| Tree-based ortholog | many-to-many | PPE_004G07860 PPE_007G04580 PPE_007G04730 ... | 4 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29733G00050 | 1 | |
| Anchor point | 1-to-1 | RC29733G00050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29733G00050 | 1 | ||
| Tree-based ortholog | many-to-1 | RC29733G00050 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL00G185750 SL12G021180 SL12G021190 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL12G021190 | 1 | ||
| Tree-based ortholog | many-to-1 | SL12G021190 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST12G016470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST12G016470 | 1 | ||
| Tree-based ortholog | many-to-1 | ST12G016480 | 1 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP7G15440 | 1 | |
| Tree-based ortholog | many-to-1 | TP7G15440 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G12870 | 1 | |
| Anchor point | 1-to-1 | TC0005G12870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0005G12870 | 1 | ||
| Tree-based ortholog | many-to-1 | TC0005G12870 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV08G03360 | 1 | |
| Anchor point | 1-to-1 | VV08G03360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G03360 | 1 | ||
| Tree-based ortholog | many-to-1 | VV08G03360 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM02G25090 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM02G25090 | 1 | ||
| Tree-based ortholog | many-to-1 | ZM02G25090 | 1 |