Integrative Orthology Viewer: PT05G15740 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT02G10430 PT05G15740 | 2 | |
Anchor point | PT02G10430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT05G15740 PT02G10430 | 2 | ||
Tree-based ortholog | PT02G10430 PT05G15740 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00063G00750 ATR_00135G00110 | 2 | |
Anchor point | 1-to-1 | ATR_00135G00110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00135G00110 | 1 | ||
Tree-based ortholog | many-to-many | ATR_00135G00110 ATR_00063G00750 | 2 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL6G12020 AL6G19650 AL7G17560 | 3 | |
Anchor point | 1-to-1 | AL7G17560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL7G17560 | 1 | ||
Tree-based ortholog | many-to-1 | AL7G17560 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT4G24580 AT5G12150 AT5G19390 | 3 | |
Anchor point | 1-to-1 | AT4G24580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G24580 | 1 | ||
Tree-based ortholog | many-to-1 | AT4G24580 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV4G13880 | 1 | |
Anchor point | 1-to-1 | BV1G09830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV1G09830 | 1 | ||
Tree-based ortholog | many-to-1 | BV1G09830 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G14600 BR02G09510 BR03G48000 ... | 5 | |
Anchor point | 1-to-many | BR03G48000 BR01G14600 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR03G48000 | 1 | ||
Tree-based ortholog | many-to-many | BR01G14600 BR08G17910 BR03G48000 | 3 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_007G15610 | 1 | |
Anchor point | 1-to-1 | CRU_007G15610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_007G15610 | 1 | ||
Tree-based ortholog | many-to-1 | CRU_007G15610 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00021G00010 | 1 | |
Anchor point | 1-to-1 | CP00021G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00021G00010 | 1 | ||
Tree-based ortholog | many-to-1 | CP00021G00010 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL03G11600 CL08G11560 | 2 | |
Anchor point | 1-to-1 | CL08G11560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL08G11560 | 1 | ||
Tree-based ortholog | many-to-1 | CL08G11560 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00004G02830 CS00120G00230 | 2 | |
Anchor point | 1-to-1 | CS00004G02830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00004G02830 | 1 | ||
Tree-based ortholog | many-to-1 | CS00004G02830 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00024G01470 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00024G01470 | 1 | ||
Tree-based ortholog | many-to-1 | CM00024G01470 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0002G31270 | 1 | |
Anchor point | 1-to-1 | EG0006G17340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0002G31270 | 1 | ||
Tree-based ortholog | many-to-1 | EG0006G17340 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV2G47810 FV5G20930 | 2 | |
Anchor point | 1-to-1 | FV5G20930 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV5G20930 | 1 | ||
Tree-based ortholog | many-to-1 | FV5G20930 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G44780 GM14G03960 | 2 | |
Anchor point | 1-to-many | GM06G09860 GM04G09780 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM06G09860 GM04G09780 | 2 | ||
Tree-based ortholog | many-to-many | GM06G09860 GM04G09780 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR05G09600 GR09G07720 GR13G25350 | 3 | |
Anchor point | 1-to-1 | GR09G23050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR09G23050 | 1 | ||
Tree-based ortholog | many-to-many | GR02G14240 GR09G23050 GR05G09600 | 3 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G046120 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ2G046120 | 1 | ||
Tree-based ortholog | many-to-1 | LJ2G046120 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G009320 MD08G004870 | 2 | |
Anchor point | 1-to-many | MD15G030180 MD08G018470 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD08G004870 | 1 | ||
Tree-based ortholog | many-to-many | MD00G319120 MD08G018470 MD15G030180 | 3 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME06916G01930 | 1 | |
Anchor point | 1-to-many | ME06916G01930 ME01624G00210 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME06916G01930 | 1 | ||
Tree-based ortholog | many-to-many | ME06916G01930 ME01624G00210 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G100580 MT5G065960 | 2 | |
Anchor point | 1-to-many | MT3G100580 MT5G065960 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT3G100580 | 1 | ||
Tree-based ortholog | many-to-many | MT3G100580 MT5G065960 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G11140 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS07G46450 | 1 | ||
Tree-based ortholog | many-to-many | OS07G46450 OS03G24180 | 2 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00078G00190 PP00271G00420 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00271G00420 PP00078G00190 | 2 | ||
Tree-based ortholog | many-to-many | PP00078G00190 PP00271G00420 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_004G29190 PPE_004G29210 | 2 | |
Anchor point | 1-to-1 | PPE_001G58630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_004G29190 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_001G58630 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29908G02820 RC30142G00060 | 2 | |
Anchor point | 1-to-1 | RC29908G02820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29908G02820 | 1 | ||
Tree-based ortholog | many-to-1 | RC29908G02820 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G008770 SL04G076140 SL11G064880 | 3 | |
Anchor point | 1-to-1 | SL04G076140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL04G076140 | 1 | ||
Tree-based ortholog | many-to-1 | SL04G076140 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G009460 ST04G029500 ST11G020720 | 3 | |
Anchor point | 1-to-1 | ST04G029500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST04G029500 | 1 | ||
Tree-based ortholog | many-to-1 | ST04G029500 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP6G25020 TP7G22580 | 2 | |
Anchor point | 1-to-1 | TP7G22580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP7G22580 | 1 | ||
Tree-based ortholog | many-to-1 | TP7G22580 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0009G24440 | 1 | |
Anchor point | 1-to-1 | TC0008G06670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0008G06670 | 1 | ||
Tree-based ortholog | many-to-1 | TC0008G06670 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV00G06730 VV06G10970 VV18G04400 | 3 | |
Anchor point | 1-to-many | VV00G06730 VV18G04390 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV18G04400 | 1 | ||
Tree-based ortholog | many-to-1 | VV18G04400 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM00G00230 ZM01G15850 ZM02G40250 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G15850 | 1 | ||
Tree-based ortholog | many-to-1 | ZM00G00230 | 1 |