Gene: ATR_00063G00750 (Amborella trichopoda)

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Gene Identifier
ATR_00063G00750
Transcript Identifier
ATR_00063G00750.1
Gene Type
Coding gene
Location
scaffold00063 : 3607061-3638802 : negative

Family

Gene family
HOM03D001590
(102 genes in 29 species)
specific family
Subfamily
ORTHO03D000989
(60 genes in 29 species)
specific family

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Descriptions

Description (AnnoMine)
Rho GTPase-activating protein REN1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00063.78
idevm_27.model.AmTr_v1.0_scaffold00063.78

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007165IEAInterProsignal transduction
GO:0009860ISOPLAZA Integrative Orthologypollen tube growthAT4G24580
GO:0048868ISOPLAZA Integrative Orthologypollen tube developmentAT4G24580
GO:0035024ISOPLAZA Integrative Orthologynegative regulation of Rho protein signal transductionAT4G24580
GO:0032862ISOPLAZA Integrative Orthologyactivation of Rho GTPase activityAT4G24580
GO:0009865ISOPLAZA Integrative Orthologypollen tube adhesionAT4G24580
GO:0009846ISOPLAZA Integrative Orthologypollen germinationAT4G24580

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0005543IEAInterProphospholipid binding
GO:0017048ISOPLAZA Integrative OrthologyRho GTPase bindingAT4G24580
GO:0005100ISOPLAZA Integrative OrthologyRho GTPase activator activityAT4G24580

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622IEAInterProintracellular
GO:0009535ISOPLAZA Integrative Orthologychloroplast thylakoid membraneAT5G19390
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT5G12150
GO:0016324ISOPLAZA Integrative Orthologyapical plasma membraneAT4G24580
GO:0090406ISOPLAZA Integrative Orthologypollen tubeAT4G24580
GO:0070382ISOPLAZA Integrative Orthologyexocytic vesicleAT4G24580
GO:0045177ISOPLAZA Integrative Orthologyapical part of cellAT4G24580
GO:0030139ISOPLAZA Integrative Orthologyendocytic vesicleAT4G24580
GO:0005938ISOPLAZA Integrative Orthologycell cortexAT4G24580

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR025757Ternary complex factor MIP1, leucine-zipper
IPR000198Rho GTPase-activating protein domain
IPR001849Pleckstrin homology domain
IPR008936Rho GTPase activation protein
IPR011993Pleckstrin homology-like domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.