Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT01G45380
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT01G45380 PT11G14790 | 2 |  |
| Anchor point | PT11G14790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT11G14790 PT01G45380 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Anchor point | 1-to-1 | ATR_00018G01050 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00030G00100 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL8G00280 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL8G00280 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT5G47610 | 1 | |
| Anchor point | 1-to-1 | AT2G37580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G47610 | 1 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-many | BV6G07810 BV6G07850 BV6G07830 ... | 5 | |
| Brassica rapa | Orthologous gene family | many-to-many | BR02G29680 BR06G36050 | 2 | |
| Anchor point | 1-to-1 | BR05G26660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR02G29680 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_008G00180 | 1 | |
| Anchor point | 1-to-1 | CRU_004G18900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_008G00180 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00019G00640 | 1 | |
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL01G01070 | 1 | |
| Anchor point | 1-to-1 | CL01G01070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL01G01070 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00009G03330 | 1 | |
| Anchor point | 1-to-1 | CS00009G03330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00009G03330 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00005G07890 | 1 | |
| Anchor point | 1-to-1 | CM00005G07890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00005G07890 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0004G21070 | 1 | |
| Anchor point | 1-to-many | EG0009G18270 EG0004G21070 EG0010G22460 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0004G21070 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV0G41290 | 1 | |
| Anchor point | 1-to-many | FV0G41290 FV7G03780 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV0G41290 | 1 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM08G15490 GM05G32240 | 2 | |
| Gossypium raimondii | Orthologous gene family | many-to-many | GR06G20400 GR07G01820 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR06G20400 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-many | LJ4G043300 LJ4G043290 | 2 | |
| Malus domestica | Orthologous gene family | many-to-many | MD00G215480 MD00G394140 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G215480 MD00G394140 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME03367G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME03367G00010 | 1 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT3G095560 | 1 | |
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS04G34230 | 1 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00100G00460 PP00085G00790 PP00185G00090 | 3 | |
| Prunus persica | Orthologous gene family | many-to-1 | PPE_005G14490 | 1 | |
| Anchor point | 1-to-1 | PPE_005G14490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_005G14490 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30068G01200 | 1 | |
| Anchor point | 1-to-1 | RC30068G01200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30068G01200 | 1 | ||
| Solanum lycopersicum | Anchor point | 1-to-1 | SL01G091770 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL06G049030 | 1 | ||
| Solanum tuberosum | Anchor point | 1-to-1 | ST08G026840 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST11G006350 | 1 | ||
| Thellungiella parvula | Anchor point | 1-to-many | TP4G19930 TP1G06310 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP2G12320 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G21320 | 1 | |
| Anchor point | 1-to-1 | TC0003G21320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0003G21320 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV13G09320 | 1 | |
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM10G16370 | 1 | |