Gene: TP2G12320 (Thellungiella parvula)
Overview 
- Gene Identifier
- TP2G12320
- Transcript Identifier
- TP2G12320.1
- Gene Type
- Coding gene
- Location
- ch2-4 : 2619576-2622709 : negative
Family
- Gene family
- Subfamily
- Duplication type
- Block duplicate
Descriptions
- Description
-
similar to AT5G47620|heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative
- Description (AnnoMine)
-
ribonucleoprotein A1, A2/B1 homolog
Identifiers
Identifier | Name |
---|---|
pid | Tp2g12320 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
- ...sequences.
- ...the multiple sequence alignment of the gene family with BioJS
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBIs protein database.
- ...the gene in Genomeview, a genome browser
- ...all colinear gene pairs.
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005515 | IEA | InterPro | protein binding | |
GO:0000166 | IEA | InterPro | nucleotide binding | |
GO:0008270 | IEA | InterPro | zinc ion binding | |
GO:0003676 | IEA | InterPro | nucleic acid binding | |
GO:1901265 | IEA | PLAZA Homology | nucleoside phosphate binding | HOM03D000057 |
GO:0005488 | IEA | PLAZA Homology | binding | HOM03D000057 |
GO:1901363 | IEA | PLAZA Homology | heterocyclic compound binding | HOM03D000057 |
GO:0036094 | IEA | PLAZA Homology | small molecule binding | HOM03D000057 |
GO:0097159 | IEA | PLAZA Homology | organic cyclic compound binding | HOM03D000057 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.