Integrative Orthology Viewer: PP00088G00900 (Physcomitrella patens)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Physcomitrella patens | Orthologous gene family | PP00088G00900 PP00144G00360 PP00144G00370 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | PP00088G00900 | 1 | ||
Tree-based ortholog | PP00144G00390 PP00144G00360 PP00144G00370 ... | 7 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00033G02630 ATR_00065G01060 ATR_00088G00630 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00130G00470 | 1 | ||
Tree-based ortholog | many-to-many | ATR_00033G02630 ATR_00151G00250 ATR_00130G00470 ... | 5 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G10500 AL1G44320 AL2G06040 ... | 10 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G19420 | 1 | ||
Tree-based ortholog | many-to-many | AL4G09070 AL3G31230 AL4G19420 ... | 10 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G10540 AT1G49960 AT1G60030 ... | 10 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G34190 | 1 | ||
Tree-based ortholog | many-to-many | AT2G26510 AT2G05760 AT2G34190 ... | 10 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV1G01680 BV5G02390 BV6G10400 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G10320 | 1 | ||
Tree-based ortholog | many-to-many | BV1G01680 BV9G18160 BV8G10320 ... | 6 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G25030 BR02G38990 BR03G23910 ... | 11 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G10310 | 1 | ||
Tree-based ortholog | many-to-many | BR03G23910 BR03G38840 BR05G10310 ... | 11 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G09530 CRU_001G37220 CRU_002G04950 ... | 9 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G15310 | 1 | ||
Tree-based ortholog | many-to-many | CRU_004G06510 CRU_003G25920 CRU_004G15310 ... | 9 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00005G03510 CP00007G00860 CP00007G01320 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00007G00860 | 1 | ||
Tree-based ortholog | many-to-many | CP01539G00020 CP00132G00200 CP00007G00860 ... | 7 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR17G04620 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR17G04620 | 1 | ||
Tree-based ortholog | many-to-1 | CR17G04620 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL02G18230 CL03G07340 CL05G20690 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G07340 | 1 | ||
Tree-based ortholog | many-to-many | CL05G20690 CL02G18230 CL03G07340 ... | 6 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00002G03460 CS00003G03010 CS00007G01230 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00007G01230 | 1 | ||
Tree-based ortholog | many-to-many | CS00002G03460 CS00126G00180 CS00007G01230 ... | 8 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00001G07830 CM00016G03370 CM00029G00980 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00001G07830 | 1 | ||
Tree-based ortholog | many-to-many | CM00029G00980 CM00039G01650 CM00001G07830 ... | 7 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G02920 EG0002G20670 EG0004G03770 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G03770 | 1 | ||
Tree-based ortholog | many-to-many | EG0006G00310 EG0011G06380 EG0004G03770 ... | 7 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV2G04800 FV2G31770 FV2G51970 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G14300 | 1 | ||
Tree-based ortholog | many-to-many | FV2G51970 FV6G39840 FV3G14300 ... | 8 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G04160 GM02G03550 GM02G43660 ... | 23 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM06G06840 GM04G06750 | 2 | ||
Tree-based ortholog | many-to-many | GM14G08690 GM17G36440 GM14G05220 ... | 24 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G09550 GR03G10990 GR05G23060 ... | 12 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G16150 | 1 | ||
Tree-based ortholog | many-to-many | GR10G01620 GR09G20850 GR07G17050 ... | 14 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G006250 LJ4G041750 LJ6G025670 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G025670 | 1 | ||
Tree-based ortholog | many-to-many | LJ2G043630 LJ4G041750 LJ6G025670 ... | 6 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G359700 MD00G515410 MD01G019560 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD13G006060 | 1 | ||
Tree-based ortholog | many-to-many | MD08G003680 MD00G359700 MD01G019560 ... | 9 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME03104G00060 ME03237G00160 ME03667G00050 ... | 12 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME06039G00120 ME05780G00100 | 2 | ||
Tree-based ortholog | many-to-many | ME03104G00060 ME03667G00050 ME05214G00350 ... | 16 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G021120 MT1G106085 MT2G016460 ... | 11 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G086520 | 1 | ||
Tree-based ortholog | many-to-many | MT1G021120 MT3G080390 MT8G086520 ... | 12 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G55500 OS02G50820 OS03G48810 ... | 9 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G15170 | 1 | ||
Tree-based ortholog | many-to-many | OS12G39420 OS01G55500 OS09G15170 ... | 9 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT02G12940 PT04G05880 PT08G14640 ... | 11 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT04G05880 PT11G06820 | 2 | ||
Tree-based ortholog | many-to-many | PT14G03580 PT02G12940 PT14G15780 ... | 12 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G27010 PPE_001G39650 PPE_001G42590 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G06100 | 1 | ||
Tree-based ortholog | many-to-many | PPE_001G39650 PPE_003G19140 PPE_004G06100 ... | 7 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29168G00190 RC29948G00220 RC30026G00060 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29168G00190 | 1 | ||
Tree-based ortholog | many-to-many | RC30170G02880 RC29948G00220 RC30026G00060 ... | 8 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G106920 SL02G072500 SL03G114030 ... | 10 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G072500 | 1 | ||
Tree-based ortholog | many-to-many | SL04G079430 SL07G049320 SL02G072500 ... | 11 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G044150 ST02G019150 ST03G027390 ... | 10 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G019150 | 1 | ||
Tree-based ortholog | many-to-many | ST04G032610 ST07G018510 ST02G019150 ... | 10 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G09190 TP1G36810 TP2G04560 ... | 9 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G16500 | 1 | ||
Tree-based ortholog | many-to-many | TP4G07550 TP3G24230 TP4G16500 ... | 10 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G17630 TC0002G11360 TC0002G24290 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G16470 | 1 | ||
Tree-based ortholog | many-to-many | TC0008G01460 TC0001G17630 TC0006G16470 ... | 8 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV01G13390 VV03G09680 VV10G02330 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV10G02330 | 1 | ||
Tree-based ortholog | many-to-many | VV18G07770 VV12G11350 VV10G02330 ... | 7 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G27970 ZM01G39210 ZM01G49390 ... | 9 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G29380 | 1 | ||
Tree-based ortholog | many-to-many | ZM01G27970 ZM08G34500 ZM02G29380 ... | 11 |