Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
LJ1G001010
(Lotus japonicus)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Lotus japonicus | Orthologous gene family | LJ1G001010 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | LJ1G001010 | 1 | ||
| Tree-based ortholog | LJ1G001010 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-many | ATR_00057G00890 ATR_00066G02280 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00066G02280 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00066G02280 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-many | AL3G18120 AL3G22530 AL7G14880 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G22530 | 1 | ||
| Tree-based ortholog | 1-to-many | AL7G14880 AL3G22530 | 2 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-many | AT3G16860 AT3G20580 AT4G16120 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G20580 | 1 | ||
| Tree-based ortholog | 1-to-many | AT4G27110 AT3G20580 | 2 | ||
| Beta vulgaris | Orthologous gene family | 1-to-many | BV0G70350 BV3G08620 BV7G00100 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G70350 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV0G70350 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR01G17410 BR01G19990 BR01G29960 ... | 8 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR03G36400 BR01G29960 | 2 | ||
| Tree-based ortholog | 1-to-many | BR01G17410 BR08G17150 BR01G29960 ... | 5 | ||
| Capsella rubella | Orthologous gene family | 1-to-many | CRU_003G15810 CRU_003G19620 CRU_007G12940 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G19620 | 1 | ||
| Tree-based ortholog | 1-to-many | CRU_007G12940 CRU_003G19620 | 2 | ||
| Carica papaya | Orthologous gene family | 1-to-many | CP00009G00990 CP00097G00510 CP00151G00470 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00097G00510 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00097G00510 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR04G01850 | 1 | |
| Citrullus lanatus | Orthologous gene family | 1-to-many | CL05G07150 CL05G15960 CL10G05290 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G15960 | 1 | ||
| Tree-based ortholog | 1-to-many | CL10G05300 CL10G05290 CL05G15960 | 3 | ||
| Citrus sinensis | Orthologous gene family | 1-to-many | CS00001G07030 CS00010G01400 CS00016G00970 ... | 4 | |
| Anchor point | N/A | CS00010G01400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00010G01400 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00010G01400 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-many | CM00006G08010 CM00032G00360 CM00078G00530 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00078G00530 | 1 | ||
| Tree-based ortholog | 1-to-many | CM00078G00530 CM00032G00360 | 2 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-many | EG0001G01440 EG0005G31140 EG0006G29150 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G31140 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0005G31140 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-many | FV3G00510 FV3G24010 FV3G39920 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G00510 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV3G24010 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM01G45080 GM07G37210 GM09G04460 ... | 7 | |
| Anchor point | N/A | GM20G27990 GM01G45080 GM10G39740 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G00560 GM01G45080 | 2 | ||
| Tree-based ortholog | 1-to-many | GM11G00560 GM01G45080 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR02G08380 GR05G06520 GR07G12570 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR10G17770 | 1 | ||
| Tree-based ortholog | 1-to-1 | GR10G17770 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD10G026010 MD11G019470 MD13G014460 ... | 4 | |
| Anchor point | N/A | MD10G026010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD10G026010 | 1 | ||
| Tree-based ortholog | 1-to-many | MD11G019470 MD03G017840 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME01551G04090 ME01796G00090 ME01945G00370 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME01796G00090 | 1 | ||
| Tree-based ortholog | 1-to-1 | ME01796G00090 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-many | MT2G034950 MT2G083210 MT4G121080 ... | 4 | |
| Anchor point | N/A | MT5G005590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G005590 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT5G005590 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-many | OS03G18910 OS06G47110 OS07G49080 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G47110 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS06G47110 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-many | PP00021G00090 PP00036G01190 PP00054G01730 ... | 8 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00021G00090 PP00233G00430 PP00195G00280 ... | 8 | ||
| Tree-based ortholog | 1-to-many | PP00195G00280 PP00054G01730 PP00233G00430 ... | 8 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT01G41900 PT10G00110 PT11G13520 ... | 4 | |
| Anchor point | N/A | PT11G02520 PT04G02050 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G41900 PT11G13520 | 2 | ||
| Tree-based ortholog | 1-to-many | PT01G41900 PT11G13520 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-many | PPE_001G11850 PPE_004G02320 PPE_004G19660 | 3 | |
| Anchor point | N/A | PPE_004G02320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G02320 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_004G19660 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-many | RC28166G00500 RC29797G00090 RC29889G00110 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29797G00090 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC28166G00500 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-many | SL01G065530 SL02G080240 SL07G064200 ... | 5 | |
| Anchor point | N/A | SL02G080240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G006450 | 1 | ||
| Tree-based ortholog | 1-to-many | SL02G080240 SL10G006450 SL07G064200 | 3 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-many | ST01G010760 ST02G023440 ST07G025760 ... | 5 | |
| Anchor point | N/A | ST02G023440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G023440 | 1 | ||
| Tree-based ortholog | 1-to-many | ST02G023440 ST10G005110 ST07G025760 ... | 4 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-many | TP2G19630 TP3G15110 TP3G18600 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G18600 | 1 | ||
| Tree-based ortholog | 1-to-many | TP7G25080 TP3G18600 | 2 | ||
| Theobroma cacao | Orthologous gene family | 1-to-many | TC0001G30600 TC0004G29470 TC0006G20860 ... | 4 | |
| Anchor point | N/A | TC0006G20790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0007G04870 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0006G20860 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-many | VV05G12030 VV07G08890 VV10G00410 ... | 4 | |
| Anchor point | N/A | VV10G00370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV10G00410 | 1 | ||
| Tree-based ortholog | 1-to-many | VV19G00510 VV10G00410 | 2 | ||
| Zea mays | Orthologous gene family | 1-to-many | ZM01G12940 ZM02G41270 ZM07G23260 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM07G23260 | 1 | ||
| Tree-based ortholog | 1-to-1 | ZM07G23260 | 1 |