Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
GM10G29560
(Glycine max)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Glycine max | Orthologous gene family | GM10G29560 GM20G37750 | 2 |  |
| Anchor point | GM20G37750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | GM10G29560 GM20G37750 | 2 | ||
| Tree-based ortholog | GM20G37750 GM10G29560 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00025G02120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00025G02120 | 1 | ||
| Tree-based ortholog | many-to-many | ATR_00025G02120 ATR_00010G00740 | 2 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL3G25010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL3G25010 | 1 | ||
| Tree-based ortholog | many-to-1 | AL3G25010 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G22660 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G22660 | 1 | ||
| Tree-based ortholog | many-to-1 | AT3G22660 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV4G03220 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV4G03220 | 1 | ||
| Tree-based ortholog | many-to-1 | BV4G03220 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR01G28670 BR03G37220 BR05G20970 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR05G20970 | 1 | ||
| Tree-based ortholog | many-to-many | BR01G28670 BR05G20970 BR03G37220 | 3 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_003G21830 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_003G21830 | 1 | ||
| Tree-based ortholog | many-to-1 | CRU_003G21830 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00003G02760 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00003G02760 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00003G02760 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR07G09330 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR07G09330 | 1 | ||
| Tree-based ortholog | many-to-1 | CR07G09330 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL01G04690 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL01G04690 | 1 | ||
| Tree-based ortholog | many-to-1 | CL01G04690 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00031G00430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00031G00430 | 1 | ||
| Tree-based ortholog | many-to-many | CS00031G00330 CS00031G00430 | 2 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00005G03800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00005G03800 | 1 | ||
| Tree-based ortholog | many-to-1 | CM00005G03800 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0005G13940 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0005G13940 | 1 | ||
| Tree-based ortholog | many-to-many | EG0011G12180 EG0005G13940 | 2 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV7G40080 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV7G40080 | 1 | ||
| Tree-based ortholog | many-to-1 | FV7G40080 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR01G04660 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR01G04660 | 1 | ||
| Tree-based ortholog | many-to-many | GR08G28370 GR01G04660 | 2 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ3G038450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ3G038450 | 1 | ||
| Tree-based ortholog | many-to-1 | LJ3G038450 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD01G017540 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD01G017540 | 1 | ||
| Tree-based ortholog | many-to-many | MD07G017050 MD01G017540 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME01127G00760 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME01127G00760 | 1 | ||
| Tree-based ortholog | many-to-1 | ME01127G00760 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT5G028350 MT8G075400 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT5G028350 | 1 | ||
| Tree-based ortholog | many-to-many | MT8G075400 MT5G028350 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS07G29320 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS07G29320 | 1 | ||
| Tree-based ortholog | many-to-1 | OS07G29320 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL12G01910 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL12G01910 | 1 | ||
| Tree-based ortholog | many-to-1 | OL12G01910 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-1 | PP00053G00790 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00053G00790 | 1 | ||
| Tree-based ortholog | many-to-1 | PP00053G00790 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT15G13120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT15G13120 | 1 | ||
| Tree-based ortholog | many-to-1 | PT15G13120 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_002G27000 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_002G27000 | 1 | ||
| Tree-based ortholog | many-to-many | PPE_002G27000 PPE_002G11870 PPE_002G11900 | 3 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29765G00150 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29765G00150 | 1 | ||
| Tree-based ortholog | many-to-1 | RC29765G00150 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G006090 SL01G006170 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G006170 | 1 | ||
| Tree-based ortholog | many-to-many | SL01G006170 SL01G006090 | 2 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST01G006460 ST01G006580 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G006580 | 1 | ||
| Tree-based ortholog | many-to-many | ST01G006460 ST01G006580 | 2 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP3G20420 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP3G20420 | 1 | ||
| Tree-based ortholog | many-to-1 | TP3G20420 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G16290 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0003G16290 | 1 | ||
| Tree-based ortholog | many-to-1 | TC0003G16290 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV16G03360 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV16G03360 | 1 | ||
| Tree-based ortholog | many-to-1 | VV16G03360 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM02G35200 ZM05G22230 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM02G35200 ZM05G22230 | 2 | ||
| Tree-based ortholog | many-to-many | ZM02G35200 ZM05G22230 | 2 |