Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
GM03G25670
(Glycine max)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Glycine max | Orthologous gene family | GM03G25670 GM07G13170 | 2 |  |
| Tree-based ortholog | GM07G13170 GM03G25670 | 2 | ||
| Anchor point | GM07G13170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | GM03G25670 GM07G13170 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00024G03370 | 1 | |
| Tree-based ortholog | many-to-1 | ATR_00002G01700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00024G03370 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL1G00070 | 1 | |
| Tree-based ortholog | many-to-1 | AL1G00070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL1G00070 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT1G02150 | 1 | |
| Tree-based ortholog | many-to-1 | AT1G02150 | 1 | ||
| Anchor point | 1-to-1 | AT1G02150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G02150 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV0G64060 | 1 | |
| Tree-based ortholog | many-to-1 | BV0G64060 | 1 | ||
| Anchor point | 1-to-1 | BV0G64060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV0G64060 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-1 | BR10G06610 | 1 | |
| Tree-based ortholog | many-to-1 | BR10G06610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR10G06610 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_001G00030 | 1 | |
| Tree-based ortholog | many-to-1 | CRU_001G00030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_001G00030 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00041G00730 | 1 | |
| Tree-based ortholog | many-to-1 | CP00041G00730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00041G00730 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR12G03110 CR10G04270 | 2 | |
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G02860 | 1 | |
| Tree-based ortholog | many-to-1 | CL05G02860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL05G02860 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00001G00530 | 1 | |
| Tree-based ortholog | many-to-1 | CS00001G00530 | 1 | ||
| Anchor point | 1-to-1 | CS00001G00530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00001G00530 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00006G03210 | 1 | |
| Tree-based ortholog | many-to-1 | CM00006G03210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00006G03210 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0004G09750 | 1 | |
| Tree-based ortholog | many-to-1 | EG0004G09750 | 1 | ||
| Anchor point | 1-to-1 | EG0004G09750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0004G09750 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV7G20440 | 1 | |
| Tree-based ortholog | many-to-1 | FV7G20440 | 1 | ||
| Anchor point | 1-to-1 | FV7G20440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV7G20440 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR04G06940 | 1 | |
| Tree-based ortholog | many-to-1 | GR04G06940 | 1 | ||
| Anchor point | 1-to-1 | GR04G06940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR04G06940 | 1 | ||
| Lotus japonicus | Tree-based ortholog | many-to-many | LJ5G027360 LJ5G027370 LJ5G017890 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | LJ5G027370 LJ5G027360 | 2 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G514620 MD02G019930 MD02G020160 | 3 | |
| Tree-based ortholog | many-to-many | MD02G020160 MD00G514620 MD02G019930 | 3 | ||
| Anchor point | 1-to-1 | MD02G019930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD02G020160 MD02G019930 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME08265G04220 ME11050G00010 | 2 | |
| Tree-based ortholog | many-to-many | ME08265G04220 ME11050G00010 | 2 | ||
| Anchor point | 1-to-1 | ME08265G04220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME11050G00010 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT8G007375 | 1 | |
| Tree-based ortholog | many-to-many | MT8G031520 MT8G007375 | 2 | ||
| Anchor point | 1-to-1 | MT8G007375 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT8G007375 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS04G46010 | 1 | |
| Tree-based ortholog | many-to-1 | OS04G46010 | 1 | ||
| Anchor point | 1-to-1 | OS04G46010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS04G46010 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | many-to-many | PP00019G00390 PP00382G00090 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00382G00090 PP00019G00390 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT02G13940 PT14G05030 | 2 | |
| Tree-based ortholog | many-to-many | PT14G05030 PT02G13940 | 2 | ||
| Anchor point | 1-to-many | PT02G13940 PT14G05030 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT02G13940 PT14G05030 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_002G12600 | 1 | |
| Tree-based ortholog | many-to-1 | PPE_002G12600 | 1 | ||
| Anchor point | 1-to-1 | PPE_002G12600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_002G12600 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29709G00090 | 1 | |
| Tree-based ortholog | many-to-1 | RC29709G00090 | 1 | ||
| Anchor point | 1-to-1 | RC29709G00090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29709G00090 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G089870 | 1 | |
| Tree-based ortholog | many-to-1 | SL01G089870 | 1 | ||
| Anchor point | 1-to-1 | SL01G089870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G089870 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST01G029110 | 1 | |
| Tree-based ortholog | many-to-1 | ST01G029110 | 1 | ||
| Anchor point | 1-to-1 | ST01G029110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G029110 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP1G00100 | 1 | |
| Tree-based ortholog | many-to-1 | TP1G00100 | 1 | ||
| Anchor point | 1-to-1 | TP1G00100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP1G00100 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0001G39330 | 1 | |
| Tree-based ortholog | many-to-1 | TC0001G39330 | 1 | ||
| Anchor point | 1-to-1 | TC0001G39330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0001G39330 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV15G01330 | 1 | |
| Tree-based ortholog | many-to-1 | VV15G01330 | 1 | ||
| Anchor point | 1-to-1 | VV15G01330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV15G01330 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM02G08140 | 1 | |
| Tree-based ortholog | many-to-1 | ZM02G08140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM02G08140 | 1 |