Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
EG0008G18380
(Eucalyptus grandis)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Eucalyptus grandis | Orthologous gene family | EG0006G00990 EG0008G18380 EG0009G05700 | 3 |  |
| Tree-based ortholog | EG0008G18380 | 1 | ||
| Anchor point | EG0009G05700 EG0006G00990 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | EG0008G18380 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00137G00440 ATR_00144G00240 | 2 | |
| Tree-based ortholog | 1-to-1 | ATR_00144G00240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00144G00240 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL4G02650 AL4G02660 AL5G19450 ... | 4 | |
| Tree-based ortholog | 1-to-1 | AL4G02660 | 1 | ||
| Anchor point | many-to-many | AL5G19450 AL4G02650 AL8G33090 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G19450 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G23070 AT2G23080 AT3G50000 ... | 4 | |
| Tree-based ortholog | 1-to-1 | AT2G23080 | 1 | ||
| Anchor point | many-to-many | AT2G23070 AT3G50000 AT5G67380 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G67380 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV6G23270 | 1 | |
| Tree-based ortholog | 1-to-1 | BV6G23270 | 1 | ||
| Anchor point | many-to-1 | BV6G23270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G23270 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR01G24020 BR04G13100 BR09G32010 ... | 4 | |
| Tree-based ortholog | 1-to-many | BR02G41420 BR01G24020 BR09G32010 ... | 4 | ||
| Anchor point | many-to-many | BR09G32010 BR09G43930 BR01G24020 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G32010 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_004G02180 CRU_004G02190 CRU_005G15300 ... | 4 | |
| Tree-based ortholog | 1-to-1 | CRU_004G02190 | 1 | ||
| Anchor point | many-to-many | CRU_004G02180 CRU_005G15300 CRU_008G26280 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G26280 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00006G00350 CP00006G00460 CP00021G01100 | 3 | |
| Tree-based ortholog | 1-to-1 | CP00006G00460 | 1 | ||
| Anchor point | many-to-1 | CP00021G01100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00006G00460 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR16G05150 | 1 | |
| Tree-based ortholog | 1-to-many | CR14G02620 CR16G05150 CR12G15120 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR16G05150 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL01G17680 CL01G17760 | 2 | |
| Tree-based ortholog | 1-to-1 | CL01G17680 | 1 | ||
| Anchor point | many-to-many | CL08G16010 CL01G17680 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G17680 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00006G01140 CS00006G01240 | 2 | |
| Tree-based ortholog | 1-to-1 | CS00006G01240 | 1 | ||
| Anchor point | many-to-many | CS00006G01140 CS00004G04310 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00006G01240 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00007G06430 CM00007G06510 CM00014G01670 | 3 | |
| Tree-based ortholog | 1-to-1 | CM00007G06430 | 1 | ||
| Anchor point | many-to-many | CM00007G06430 CM00014G01670 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00007G06430 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV0G19020 FV1G24870 FV6G05590 | 3 | |
| Tree-based ortholog | 1-to-1 | FV1G24870 | 1 | ||
| Anchor point | many-to-1 | FV2G31340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G24870 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM01G39950 GM05G22250 GM05G22320 ... | 6 | |
| Tree-based ortholog | 1-to-1 | GM17G17790 | 1 | ||
| Anchor point | many-to-many | GM01G39950 GM11G05340 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM05G22250 GM17G17790 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR03G02920 GR03G02930 GR07G05610 ... | 6 | |
| Tree-based ortholog | 1-to-1 | GR08G08050 | 1 | ||
| Anchor point | many-to-many | GR07G22220 GR03G02920 GR08G08050 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G10750 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ4G015060 LJ4G015510 | 2 | |
| Tree-based ortholog | 1-to-1 | LJ4G015510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G015510 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G476300 MD02G016210 MD15G002110 ... | 4 | |
| Tree-based ortholog | 1-to-many | MD15G023260 MD02G016210 | 2 | ||
| Anchor point | many-to-many | MD02G016210 MD15G023260 MD15G002110 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD02G016210 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME03363G00110 ME03363G00180 ME09870G00210 ... | 4 | |
| Tree-based ortholog | 1-to-1 | ME10878G00250 | 1 | ||
| Anchor point | many-to-many | ME03363G00110 ME09870G00210 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME10878G00250 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT4G095400 MT4G095670 MT5G015830 | 3 | |
| Tree-based ortholog | 1-to-1 | MT4G095400 | 1 | ||
| Anchor point | many-to-many | MT5G015830 MT4G095400 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G095400 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G10940 OS03G55490 OS07G02350 | 3 | |
| Tree-based ortholog | 1-to-1 | OS03G10940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G02350 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL12G02610 | 1 | |
| Tree-based ortholog | 1-to-1 | OL12G02610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL12G02610 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00063G00840 PP00165G00510 PP00165G00570 ... | 4 | |
| Tree-based ortholog | 1-to-many | PP00165G00570 PP00063G00840 PP00165G00510 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00230G00380 PP00165G00510 PP00063G00840 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT05G14590 PT05G14600 PT07G05280 ... | 4 | |
| Tree-based ortholog | 1-to-many | PT05G14590 PT07G05280 | 2 | ||
| Anchor point | many-to-many | PT07G05280 PT02G12000 PT05G14590 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT05G14590 PT07G05280 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_001G42930 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_006G23280 | 1 | ||
| Anchor point | many-to-1 | PPE_006G23160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G23280 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29172G00060 RC29661G00070 | 2 | |
| Tree-based ortholog | 1-to-1 | RC29172G00060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29661G00070 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G064700 SL02G092640 SL03G044140 | 3 | |
| Tree-based ortholog | 1-to-many | SL02G092640 SL03G044140 | 2 | ||
| Anchor point | many-to-many | SL02G064700 SL02G092640 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G044140 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST02G011470 ST02G031110 ST03G010360 | 3 | |
| Tree-based ortholog | 1-to-many | ST02G031110 ST03G010360 | 2 | ||
| Anchor point | many-to-many | ST02G031110 ST02G011470 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G010360 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP4G02090 TP4G02100 TP5G12100 | 3 | |
| Tree-based ortholog | 1-to-1 | TP4G02100 | 1 | ||
| Anchor point | many-to-many | TP5G12100 TP4G02090 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G12100 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0001G06620 TC0001G06770 TC0008G08810 | 3 | |
| Tree-based ortholog | 1-to-1 | TC0001G06620 | 1 | ||
| Anchor point | many-to-many | TC0008G08810 TC0001G06620 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G06620 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV07G00260 VV07G00400 VV18G06150 | 3 | |
| Tree-based ortholog | 1-to-1 | VV07G00400 | 1 | ||
| Anchor point | many-to-1 | VV18G06150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G00400 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G53650 ZM02G47150 ZM05G03800 | 3 | |
| Tree-based ortholog | 1-to-many | ZM05G03800 ZM01G53650 ZM02G47150 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM01G53650 ZM05G03800 | 2 |