Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CS00103G00720
(Citrus sinensis)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Citrus sinensis | Orthologous gene family | CS00103G00720 | 1 |  |
| Tree-based ortholog | CS01432G00010 CS00103G00720 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | CS00103G00720 CS01432G00010 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | many-to-1 | ATR_00025G03870 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00025G03870 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | many-to-1 | AL3G05170 | 1 | |
| Anchor point | N/A | AL3G05170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL3G05170 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | many-to-1 | AT3G05327 | 1 | |
| Anchor point | N/A | AT3G05327 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G44740 | 1 | ||
| Beta vulgaris | Tree-based ortholog | many-to-1 | BV4G04110 | 1 | |
| Anchor point | N/A | BV4G04110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV4G04110 | 1 | ||
| Brassica rapa | Tree-based ortholog | many-to-1 | BR09G41950 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR10G25280 | 1 | ||
| Capsella rubella | Tree-based ortholog | many-to-1 | CRU_003G04420 | 1 | |
| Anchor point | N/A | CRU_003G04420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_005G28310 | 1 | ||
| Carica papaya | Tree-based ortholog | many-to-1 | CP00048G00440 | 1 | |
| Anchor point | N/A | CP00048G00440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00048G00440 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR02G11190 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR02G11190 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | many-to-1 | CL02G16080 | 1 | |
| Anchor point | N/A | CL02G16080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL02G16080 | 1 | ||
| Cucumis melo | Tree-based ortholog | many-to-1 | CM00003G03930 | 1 | |
| Anchor point | N/A | CM00003G03930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00003G03930 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | many-to-1 | EG0002G15760 | 1 | |
| Anchor point | N/A | EG0002G15760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0008G12740 | 1 | ||
| Fragaria vesca | Tree-based ortholog | many-to-1 | FV6G05820 | 1 | |
| Anchor point | N/A | FV6G05820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV6G05820 | 1 | ||
| Glycine max | Tree-based ortholog | many-to-1 | GM19G42390 | 1 | |
| Anchor point | N/A | GM19G42390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM03G31030 GM19G33860 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | many-to-1 | GR04G24170 | 1 | |
| Anchor point | N/A | GR04G24170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR04G24170 | 1 | ||
| Lotus japonicus | Tree-based ortholog | many-to-1 | LJ1G036340 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ1G036340 | 1 | ||
| Malus domestica | Tree-based ortholog | many-to-many | MD11G026000 MD03G022960 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD11G026000 MD03G022960 | 2 | ||
| Manihot esculenta | Tree-based ortholog | many-to-1 | ME03572G00110 | 1 | |
| Anchor point | N/A | ME03572G00110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME11998G00940 | 1 | ||
| Medicago truncatula | Tree-based ortholog | many-to-1 | MT7G094880 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT7G094880 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | many-to-1 | OS05G33040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS05G33040 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | many-to-many | PP00008G01630 PP00387G00290 PP00044G00530 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00387G00290 PP00387G00300 PP00062G00520 ... | 5 | ||
| Populus trichocarpa | Tree-based ortholog | many-to-many | PT05G03360 PT13G02300 | 2 | |
| Anchor point | N/A | PT05G03360 PT13G02300 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT13G02300 PT05G03360 | 2 | ||
| Prunus persica | Tree-based ortholog | many-to-1 | PPE_006G33140 | 1 | |
| Anchor point | N/A | PPE_006G33140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_006G33140 | 1 | ||
| Ricinus communis | Tree-based ortholog | many-to-1 | RC30128G01620 | 1 | |
| Anchor point | N/A | RC30128G01620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30128G01620 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | many-to-1 | SL01G098930 | 1 | |
| Anchor point | N/A | SL01G098930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G098930 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | many-to-1 | ST01G036690 | 1 | |
| Anchor point | N/A | ST01G036690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G036690 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | many-to-1 | TP3G04190 | 1 | |
| Anchor point | N/A | TP3G04190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G00420 | 1 | ||
| Theobroma cacao | Tree-based ortholog | many-to-1 | TC0005G30220 | 1 | |
| Anchor point | N/A | TC0005G30220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0005G30220 | 1 | ||
| Vitis vinifera | Tree-based ortholog | many-to-1 | VV14G00360 | 1 | |
| Anchor point | N/A | VV14G00360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV16G01740 | 1 | ||
| Zea mays | Tree-based ortholog | many-to-1 | ZM06G23780 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G21620 | 1 |