Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CS00079G00140
(Citrus sinensis)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Citrus sinensis | Orthologous gene family | CS00079G00140 CS08709G00010 | 2 |  |
| Best-Hits-and-Inparalogs(BHI)family | CS00079G00140 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00030G01720 | 1 | |
| Anchor point | N/A | ATR_00030G01720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00030G01720 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL5G22350 | 1 | |
| Anchor point | N/A | AL5G22350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G22350 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G52500 | 1 | |
| Anchor point | N/A | AT3G52500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G52500 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV7G10960 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G10960 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR03G42540 BR04G05680 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G05680 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_005G17750 | 1 | |
| Anchor point | N/A | CRU_005G17750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G17750 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00104G00490 | 1 | |
| Anchor point | N/A | CP00104G00490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00104G00490 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G11180 | 1 | |
| Citrullus lanatus | Orthologous gene family | many-to-many | CL01G08910 CL10G16570 | 2 | |
| Anchor point | N/A | CL10G16570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G16570 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00011G04530 CM00068G01330 | 2 | |
| Anchor point | N/A | CM00011G04530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00011G04530 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0001G21940 | 1 | |
| Anchor point | N/A | EG0001G21940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G21940 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV6G30880 | 1 | |
| Anchor point | N/A | FV6G30880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G30880 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM02G35730 GM03G35900 GM10G09490 ... | 4 | |
| Anchor point | N/A | GM03G35900 GM19G38560 GM02G35730 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM03G35900 GM19G38560 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR02G23600 GR06G15060 GR09G08320 | 3 | |
| Anchor point | N/A | GR09G08320 GR02G23600 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G08320 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G066830 | 1 | |
| Anchor point | N/A | LJ1G066830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G066830 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD12G003250 | 1 | |
| Anchor point | N/A | MD14G003420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD12G003250 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME02892G00620 ME11279G00320 | 2 | |
| Anchor point | N/A | ME11279G00320 ME02892G00620 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME11279G00320 ME02892G00620 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT7G105850 | 1 | |
| Anchor point | N/A | MT7G105850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G105850 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS04G58840 | 1 | |
| Anchor point | N/A | OS04G58840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G58840 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00157G00370 PP00006G00090 PP00174G00020 ... | 5 | |
| Populus trichocarpa | Orthologous gene family | many-to-many | PT06G20470 PT09G16240 PT16G07190 | 3 | |
| Anchor point | N/A | PT16G07190 PT06G20470 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT09G16240 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_006G14310 PPE_007G11980 PPE_008G05830 | 3 | |
| Anchor point | N/A | PPE_007G11980 PPE_006G14310 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PPE_008G05830 PPE_006G14310 | 2 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC28684G00010 RC30055G00930 | 2 | |
| Anchor point | N/A | RC30055G00930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30055G00930 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL06G074000 | 1 | |
| Anchor point | N/A | SL06G074000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G074000 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST06G030140 ST11G025330 | 2 | |
| Anchor point | N/A | ST11G025330 ST06G030140 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G030140 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP5G09800 | 1 | |
| Anchor point | N/A | TP5G09800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G09800 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0005G09970 TC0009G27060 | 2 | |
| Anchor point | N/A | TC0005G09970 TC0009G27060 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G27060 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV08G12740 | 1 | |
| Anchor point | N/A | VV06G09540 VV08G12770 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G12740 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G08510 | 1 | |