Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CS00002G01600
(Citrus sinensis)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Citrus sinensis | Orthologous gene family | CS00002G01600 | 1 |  |
| Tree-based ortholog | CS00002G01600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CS00002G01600 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00010G03200 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00010G03200 | 1 | ||
| Anchor point | N/A | ATR_00010G03200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00010G03200 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-many | AL1G35570 AL6G31800 | 2 | |
| Tree-based ortholog | 1-to-many | AL1G35570 AL6G31800 | 2 | ||
| Anchor point | N/A | AL1G35570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G31800 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-many | AT1G34200 AT4G09670 | 2 | |
| Tree-based ortholog | 1-to-many | AT1G34200 AT4G09670 | 2 | ||
| Anchor point | N/A | AT1G34200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G09670 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV0G07760 | 1 | |
| Tree-based ortholog | 1-to-1 | BV0G07760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G07760 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR03G25360 BR06G01880 BR09G25620 | 3 | |
| Tree-based ortholog | 1-to-many | BR09G25620 BR06G01880 BR03G25360 | 3 | ||
| Anchor point | N/A | BR09G25620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G25360 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-many | CRU_001G30800 CRU_006G27140 | 2 | |
| Tree-based ortholog | 1-to-many | CRU_001G30800 CRU_006G27140 | 2 | ||
| Anchor point | N/A | CRU_001G30800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G27140 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-many | CP00026G01440 CP00026G01460 | 2 | |
| Tree-based ortholog | 1-to-many | CP00026G01440 CP00026G01460 | 2 | ||
| Anchor point | N/A | CP00026G01440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CP00026G01440 CP00026G01460 | 2 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR01G00730 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G00730 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-many | CL02G08070 CL08G08550 CL08G08560 ... | 4 | |
| Tree-based ortholog | 1-to-many | CL08G08570 CL08G08560 CL02G08070 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G08550 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-many | CM00040G01810 CM00040G01820 | 2 | |
| Tree-based ortholog | 1-to-many | CM00040G01820 CM00040G01810 | 2 | ||
| Anchor point | N/A | CM00040G01810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00040G01810 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0006G21880 | 1 | |
| Tree-based ortholog | 1-to-many | EG0006G21880 EG0006G21870 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G21880 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV2G20530 | 1 | |
| Tree-based ortholog | 1-to-1 | FV2G20530 | 1 | ||
| Anchor point | N/A | FV2G20530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G20530 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM02G08390 GM20G31250 | 2 | |
| Tree-based ortholog | 1-to-many | GM20G31250 GM10G36331 GM02G08390 | 3 | ||
| Anchor point | N/A | GM10G36331 GM20G31250 GM02G08390 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM02G08390 | 1 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR09G26030 GR09G28700 | 2 | |
| Tree-based ortholog | 1-to-many | GR09G28700 GR09G26030 | 2 | ||
| Anchor point | N/A | GR09G26030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G28700 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD00G063530 | 1 | |
| Tree-based ortholog | 1-to-many | MD00G063530 MD00G246260 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G063530 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME06814G00600 | 1 | |
| Tree-based ortholog | 1-to-1 | ME06814G00600 | 1 | ||
| Anchor point | N/A | ME06814G00600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06814G00600 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-many | MT1G097250 MT6G038350 MT6G038370 ... | 6 | |
| Tree-based ortholog | 1-to-many | MT6G038650 MT6G038640 MT1G097250 | 3 | ||
| Anchor point | N/A | MT1G097250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT6G038650 MT6G038640 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS10G26400 | 1 | |
| Tree-based ortholog | 1-to-many | OS10G26390 OS10G26400 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS10G26400 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-many | PP00010G02070 PP00195G00350 | 2 | |
| Tree-based ortholog | 1-to-many | PP00010G02070 PP00195G00350 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00010G02070 PP00195G00350 | 2 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT05G20020 PT05G20030 | 2 | |
| Tree-based ortholog | 1-to-many | PT05G20030 PT05G20020 | 2 | ||
| Anchor point | N/A | PT05G20020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT05G20020 PT05G20030 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_008G05190 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_008G05190 | 1 | ||
| Anchor point | N/A | PPE_008G05190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G05190 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC28644G00370 | 1 | |
| Tree-based ortholog | 1-to-1 | RC28644G00370 | 1 | ||
| Anchor point | N/A | RC28644G00370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28644G00370 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-many | SL04G072240 SL12G056800 | 2 | |
| Tree-based ortholog | 1-to-1 | SL12G056800 | 1 | ||
| Anchor point | N/A | SL04G072240 SL12G056800 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G072240 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-many | ST04G025960 ST12G025290 | 2 | |
| Tree-based ortholog | 1-to-1 | ST12G025290 | 1 | ||
| Anchor point | N/A | ST12G025290 ST04G025960 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST12G025290 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-many | TP1G29430 TP6G07930 | 2 | |
| Tree-based ortholog | 1-to-many | TP1G29430 TP6G07930 | 2 | ||
| Anchor point | N/A | TP1G29430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G07930 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0008G19790 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0008G19790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G19790 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV00G22120 | 1 | |
| Tree-based ortholog | 1-to-many | VV00G22070 VV00G22110 VV00G22120 | 3 | ||
| Anchor point | N/A | VV00G22070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G22120 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-many | ZM01G44820 ZM05G11420 | 2 | |
| Tree-based ortholog | 1-to-many | ZM01G44820 ZM05G11420 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM01G44820 ZM05G11420 | 2 |