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Integrative Orthology Viewer:
CRU_007G12970
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_001G37970 CRU_003G19600 CRU_007G12970 | 3 |  |
| Tree-based ortholog | CRU_007G12970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_007G12970 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00004G02760 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00004G02760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00004G02760 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G45520 AL3G22510 AL7G14910 | 3 | |
| Tree-based ortholog | 1-to-1 | AL7G14910 | 1 | ||
| Anchor point | N/A | AL7G14910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G14910 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G50950 AT3G20560 AT4G27080 | 3 | |
| Tree-based ortholog | 1-to-1 | AT4G27080 | 1 | ||
| Anchor point | N/A | AT4G27080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G27080 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV0G70380 | 1 | |
| Tree-based ortholog | 1-to-1 | BV0G70380 | 1 | ||
| Anchor point | N/A | BV0G70380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G70380 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR03G36380 BR03G49470 BR05G18080 ... | 6 | |
| Tree-based ortholog | 1-to-1 | BR03G49470 | 1 | ||
| Anchor point | N/A | BR08G17170 BR03G49470 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G49470 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00097G00480 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00097G00480 | 1 | ||
| Anchor point | N/A | CP00097G00480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00097G00480 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR02G08120 | 1 | |
| Tree-based ortholog | 1-to-1 | CR02G08120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G08120 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G15940 | 1 | |
| Tree-based ortholog | 1-to-1 | CL05G15940 | 1 | ||
| Anchor point | N/A | CL05G15940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G15940 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00215G00060 | 1 | |
| Tree-based ortholog | 1-to-many | CS00893G00010 CS00215G00060 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00215G00060 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00032G00380 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00032G00380 | 1 | ||
| Anchor point | N/A | CM00032G00380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00032G00380 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0006G29180 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0006G29180 | 1 | ||
| Anchor point | N/A | EG0006G29180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G29180 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV3G24050 | 1 | |
| Tree-based ortholog | 1-to-1 | FV3G24050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G24050 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM06G42130 GM12G16311 GM12G34090 ... | 4 | |
| Tree-based ortholog | 1-to-many | GM07G39845 GM12G34090 GM13G36450 ... | 5 | ||
| Anchor point | N/A | GM06G42130 GM13G36450 GM12G34090 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM06G42130 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR04G02810 GR09G42610 GR13G16310 | 3 | |
| Tree-based ortholog | 1-to-many | GR09G42610 GR13G16310 GR04G02810 | 3 | ||
| Anchor point | N/A | GR13G16310 GR09G42610 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G42610 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G005780 | 1 | |
| Malus domestica | Orthologous gene family | many-to-many | MD03G017790 MD11G019430 | 2 | |
| Tree-based ortholog | 1-to-many | MD00G405410 MD11G019430 MD03G017790 | 3 | ||
| Anchor point | N/A | MD11G019430 MD03G017790 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD03G017790 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME03980G00020 | 1 | |
| Tree-based ortholog | 1-to-1 | ME03980G00020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03980G00020 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT2G083260 MT4G080800 | 2 | |
| Tree-based ortholog | 1-to-many | MT4G080800 MT2G083260 | 2 | ||
| Anchor point | N/A | MT4G080800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G080800 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS07G34030 | 1 | |
| Tree-based ortholog | 1-to-1 | OS07G34030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G34030 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL08G03650 | 1 | |
| Tree-based ortholog | 1-to-many | OL08G03650 OL05G04660 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL08G03650 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-1 | PP00034G00240 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00034G00240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00034G00240 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G41930 PT11G13550 | 2 | |
| Tree-based ortholog | 1-to-many | PT01G41930 PT11G13550 | 2 | ||
| Anchor point | N/A | PT11G13550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT11G13550 PT01G41930 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_004G19690 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_004G19690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G19690 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC28166G00530 | 1 | |
| Tree-based ortholog | 1-to-1 | RC28166G00530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28166G00530 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL07G064250 | 1 | |
| Tree-based ortholog | 1-to-1 | SL07G064250 | 1 | ||
| Anchor point | N/A | SL07G064250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G064250 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST07G025890 | 1 | |
| Tree-based ortholog | 1-to-1 | ST07G025890 | 1 | ||
| Anchor point | N/A | ST07G025890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G025890 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G37690 TP3G18580 TP7G25050 | 3 | |
| Tree-based ortholog | 1-to-1 | TP7G25050 | 1 | ||
| Anchor point | N/A | TP7G25050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G25050 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0007G04840 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0007G04840 | 1 | ||
| Anchor point | N/A | TC0007G04840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0007G04840 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV19G00540 | 1 | |
| Tree-based ortholog | 1-to-1 | VV19G00540 | 1 | ||
| Anchor point | N/A | VV19G00540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV19G00540 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM02G36490 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM02G36490 | 1 | ||
| Anchor point | N/A | ZM02G36490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G36490 | 1 |