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Integrative Orthology Viewer:
CRU_005G21040
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_003G08920 CRU_005G21040 CRU_006G04750 | 3 |  |
| Tree-based ortholog | CRU_005G21040 | 1 | ||
| Anchor point | CRU_006G04750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_005G21040 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00012G03570 ATR_00053G01060 | 2 | |
| Tree-based ortholog | 1-to-1 | ATR_00012G03570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00012G03570 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL5G25790 AL6G05590 | 2 | |
| Tree-based ortholog | 1-to-1 | AL5G25790 | 1 | ||
| Anchor point | 1-to-many | AL3G11770 AL6G05590 AL5G25790 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G25790 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G10160 AT3G55630 AT5G05980 | 3 | |
| Tree-based ortholog | 1-to-1 | AT3G55630 | 1 | ||
| Anchor point | 1-to-many | AT5G05980 AT3G55630 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G55630 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV2G05980 BV3G12150 | 2 | |
| Tree-based ortholog | 1-to-1 | BV2G05980 | 1 | ||
| Anchor point | 1-to-1 | BV2G05980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G05980 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR02G04200 BR10G24220 | 2 | |
| Tree-based ortholog | 1-to-many | BR03G02140 BR10G24220 | 2 | ||
| Anchor point | 1-to-1 | BR10G24220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G24220 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00120G00120 CP00776G00010 | 2 | |
| Tree-based ortholog | 1-to-1 | CP00776G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00776G00010 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-many | CR05G04150 CR05G04170 | 2 | |
| Tree-based ortholog | 1-to-many | CR05G04170 CR05G04150 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR05G04170 CR05G04150 | 2 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL09G19330 CL10G13680 | 2 | |
| Tree-based ortholog | 1-to-1 | CL09G19330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G19330 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00021G01480 CS00234G00050 | 2 | |
| Tree-based ortholog | 1-to-1 | CS00021G01480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00021G01480 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00011G07650 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00011G07650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00011G07650 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G19200 EG0010G18410 | 2 | |
| Tree-based ortholog | 1-to-1 | EG0010G18410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G18410 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV6G33780 FV7G28310 | 2 | |
| Tree-based ortholog | 1-to-1 | FV7G28310 | 1 | ||
| Anchor point | 1-to-1 | FV7G28310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G28310 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM02G34760 GM02G41870 GM10G16410 ... | 5 | |
| Tree-based ortholog | 1-to-many | GM18G03820 GM02G41870 GM14G07100 | 3 | ||
| Anchor point | 1-to-many | GM14G07100 GM02G41870 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM18G03820 | 1 | ||
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G27080 | 1 | |
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ5G015090 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ5G015090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G015090 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD01G012850 MD09G028380 MD14G008770 | 3 | |
| Tree-based ortholog | 1-to-many | MD09G028380 MD01G012850 | 2 | ||
| Anchor point | 1-to-1 | MD01G012850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD01G012850 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME06908G00280 ME09692G00070 ME11287G00050 | 3 | |
| Tree-based ortholog | 1-to-1 | ME06908G00280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06908G00280 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G051385 MT3G069160 MT3G069180 ... | 4 | |
| Tree-based ortholog | 1-to-many | MT3G069160 MT3G069180 MT5G081250 | 3 | ||
| Anchor point | 1-to-1 | MT5G081250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G081250 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G02030 OS10G35940 | 2 | |
| Tree-based ortholog | 1-to-many | OS03G02030 OS10G35940 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G02030 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL09G01660 | 1 | |
| Tree-based ortholog | 1-to-1 | OL09G01660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL09G01660 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00196G00060 PP00210G00230 | 2 | |
| Tree-based ortholog | 1-to-many | PP00210G00230 PP00196G00060 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00196G00060 PP00210G00230 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT06G04540 PT08G06060 PT10G19780 ... | 4 | |
| Tree-based ortholog | 1-to-many | PT10G19780 PT08G06060 | 2 | ||
| Anchor point | 1-to-1 | PT10G19780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT08G06060 PT10G19780 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_002G23200 PPE_003G13140 | 2 | |
| Tree-based ortholog | 1-to-1 | PPE_002G23200 | 1 | ||
| Anchor point | 1-to-1 | PPE_002G23200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G23200 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC28470G00160 RC30143G00370 | 2 | |
| Tree-based ortholog | 1-to-1 | RC30143G00370 | 1 | ||
| Anchor point | 1-to-1 | RC30143G00370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30143G00370 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL05G052920 | 1 | |
| Tree-based ortholog | 1-to-1 | SL05G052920 | 1 | ||
| Anchor point | 1-to-1 | SL05G052920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G052920 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST04G014580 ST05G025620 | 2 | |
| Tree-based ortholog | 1-to-1 | ST05G025620 | 1 | ||
| Anchor point | 1-to-1 | ST05G025620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G025620 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP3G08440 TP5G06840 TP6G36910 | 3 | |
| Tree-based ortholog | 1-to-1 | TP5G06840 | 1 | ||
| Anchor point | 1-to-many | TP5G06840 TP6G36910 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G06840 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G14640 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0010G03210 | 1 | ||
| Anchor point | 1-to-1 | TC0010G03210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G03210 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV08G09670 VV13G04640 | 2 | |
| Tree-based ortholog | 1-to-1 | VV13G04640 | 1 | ||
| Anchor point | 1-to-1 | VV13G04640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G04640 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM09G29480 | 1 | |
| Tree-based ortholog | 1-to-many | ZM09G29480 ZM01G40760 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G29480 | 1 |