Integrative Orthology Viewer: CRU_005G19240 (Capsella rubella)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Capsella rubella | Orthologous gene family | CRU_005G19240 CRU_006G24130 | 2 | |
Tree-based ortholog | CRU_005G19240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | CRU_005G19240 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00016G03360 ATR_00045G02580 | 2 | |
Tree-based ortholog | 1-to-many | ATR_00045G02580 ATR_00016G03360 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00016G03360 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL5G23930 AL6G27580 | 2 | |
Tree-based ortholog | 1-to-many | AL5G23930 AL6G27580 | 2 | ||
Anchor point | N/A | AL5G23930 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G23930 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT5G27700 | 1 | |
Tree-based ortholog | 1-to-many | AT3G53890 AT5G27700 | 2 | ||
Anchor point | N/A | AT3G53890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G27700 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV4G07070 | 1 | |
Tree-based ortholog | 1-to-1 | BV4G07070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G07070 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G36040 BR04G05090 BR06G27610 ... | 5 | |
Tree-based ortholog | 1-to-many | BR09G03930 BR02G36040 BR06G27610 | 3 | ||
Anchor point | N/A | BR07G13990 BR09G35010 BR04G05090 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR02G36040 BR09G03930 BR06G27610 | 3 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00009G00380 CP00048G00880 | 2 | |
Tree-based ortholog | 1-to-many | CP00009G00380 CP00048G00880 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00009G00380 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR03G13620 | 1 | |
Tree-based ortholog | 1-to-1 | CR03G13620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G13620 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL05G06810 CL06G04930 | 2 | |
Tree-based ortholog | 1-to-many | CL05G06810 CL06G04930 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CL06G04930 CL05G06810 | 2 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00103G00170 CS00103G00230 | 2 | |
Tree-based ortholog | 1-to-many | CS00103G00230 CS00103G00170 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CS00103G00230 CS00103G00170 | 2 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00006G07670 CM00047G02050 | 2 | |
Tree-based ortholog | 1-to-many | CM00047G02050 CM00006G07670 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CM00006G07670 CM00047G02050 | 2 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G15250 EG0008G36630 | 2 | |
Tree-based ortholog | 1-to-many | EG0002G15250 EG0008G36630 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0002G15250 EG0008G36630 | 2 | ||
Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G12870 | 1 | |
Glycine max | Orthologous gene family | many-to-many | GM09G05030 GM15G15800 | 2 | |
Tree-based ortholog | 1-to-many | GM15G15800 GM09G05030 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM09G05030 GM15G15800 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR07G29970 GR07G34160 GR13G20540 | 3 | |
Tree-based ortholog | 1-to-many | GR13G20540 GR07G29970 GR07G34160 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR13G20540 GR07G29970 GR07G34160 | 3 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G489220 MD02G009110 MD13G015690 | 3 | |
Tree-based ortholog | 1-to-many | MD02G009110 MD00G489220 MD00G166870 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD02G009110 MD00G489220 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME03614G04980 ME11110G00190 | 2 | |
Tree-based ortholog | 1-to-many | ME03614G04980 ME03344G00020 ME11110G00190 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME11110G00190 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT2G436800 MT7G076530 | 2 | |
Tree-based ortholog | 1-to-many | MT7G076530 MT2G436800 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT7G076530 MT2G436800 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G46490 | 1 | |
Tree-based ortholog | 1-to-1 | OS03G46490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G46490 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL15G01390 | 1 | |
Tree-based ortholog | 1-to-1 | OL15G01390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL15G01390 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00010G00150 PP00287G00170 PP00306G00160 ... | 4 | |
Tree-based ortholog | 1-to-many | PP00372G00080 PP00306G00160 PP00287G00170 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00372G00080 PP00306G00160 PP00287G00170 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT05G02600 PT13G01760 | 2 | |
Tree-based ortholog | 1-to-many | PT05G02600 PT13G01760 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT05G02600 PT13G01760 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G12930 PPE_006G09240 | 2 | |
Tree-based ortholog | 1-to-many | PPE_006G09240 PPE_001G12930 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G12930 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29726G01460 RC30128G02120 | 2 | |
Tree-based ortholog | 1-to-many | RC30128G02120 RC29726G01460 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30128G02120 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G066840 SL04G074900 SL04G074910 | 3 | |
Tree-based ortholog | 1-to-many | SL04G074910 SL04G074900 SL01G066840 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G066840 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G020950 ST04G029760 | 2 | |
Tree-based ortholog | 1-to-many | ST04G029760 ST04G029770 ST01G020950 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G020950 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G16650 TP2G20860 TP5G08510 | 3 | |
Tree-based ortholog | 1-to-many | TP5G08510 TP2G16650 | 2 | ||
Anchor point | N/A | TP5G08510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TP2G16650 TP5G08510 | 2 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0005G30990 TC0007G17550 TC0007G17560 | 3 | |
Tree-based ortholog | 1-to-many | TC0007G17550 TC0007G17560 TC0005G30990 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TC0007G17560 TC0007G17550 | 2 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV05G03100 VV14G08890 | 2 | |
Tree-based ortholog | 1-to-many | VV14G08890 VV05G03100 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G08890 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G15190 ZM05G00870 ZM06G13920 ... | 4 | |
Tree-based ortholog | 1-to-many | ZM06G13920 ZM07G00150 ZM09G21260 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G00870 ZM01G15190 ZM06G21800 | 3 |