Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CRU_005G17410
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_005G17410 | 1 |  |
| Tree-based ortholog | CRU_005G17410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_005G17410 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00050G00230 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00050G00230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00050G00230 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL5G21930 | 1 | |
| Tree-based ortholog | 1-to-1 | AL5G21930 | 1 | ||
| Anchor point | N/A | AL5G21930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G21930 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G52180 | 1 | |
| Tree-based ortholog | 1-to-1 | AT3G52180 | 1 | ||
| Anchor point | N/A | AT3G52180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G52180 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV0G07840 | 1 | |
| Tree-based ortholog | 1-to-1 | BV0G07840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G07840 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR04G05920 BR09G33760 | 2 | |
| Tree-based ortholog | 1-to-many | BR04G05920 BR09G33730 BR09G33760 | 3 | ||
| Anchor point | N/A | BR09G33730 BR04G05920 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G33760 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00128G00700 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00128G00700 | 1 | ||
| Anchor point | N/A | CP00128G00700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00128G00700 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR03G02210 | 1 | |
| Tree-based ortholog | 1-to-1 | CR03G02210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G02210 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL05G22570 | 1 | |
| Tree-based ortholog | 1-to-1 | CL05G22570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G22570 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00398G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00398G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00398G00010 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00016G07220 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00016G07220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G07220 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0007G21410 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0007G21410 | 1 | ||
| Anchor point | N/A | EG0007G21410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G21410 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV7G30850 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G17720 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM10G34370 GM20G33190 | 2 | |
| Tree-based ortholog | 1-to-many | GM20G33190 GM10G34370 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM20G33190 GM10G34370 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR12G02520 | 1 | |
| Tree-based ortholog | 1-to-1 | GR12G02520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR12G02520 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ1G016960 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G016960 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD15G023760 | 1 | |
| Tree-based ortholog | 1-to-many | MD11G014470 MD00G297920 MD15G023760 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD15G023760 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME07413G00050 | 1 | |
| Tree-based ortholog | 1-to-many | ME07413G00050 ME11232G00140 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07413G00050 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT1G090867 | 1 | |
| Tree-based ortholog | 1-to-1 | MT1G090867 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G090867 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS03G01750 | 1 | |
| Tree-based ortholog | 1-to-1 | OS03G01750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G01750 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-many | OL13G02730 OL21G00270 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL02G00870 OL02G00860 | 2 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-many | PP00014G00940 PP00144G00150 | 2 | |
| Tree-based ortholog | 1-to-many | PP00144G00150 PP00014G00940 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00014G00940 PP00144G00150 | 2 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT08G02930 PT10G23220 | 2 | |
| Tree-based ortholog | 1-to-many | PT10G23220 PT08G02930 | 2 | ||
| Anchor point | N/A | PT10G23220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G23220 PT08G02930 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_002G09620 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_002G09620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G09620 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC27916G00030 | 1 | |
| Tree-based ortholog | 1-to-1 | RC27916G00030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC27916G00030 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-many | SL03G111160 SL11G007830 | 2 | |
| Tree-based ortholog | 1-to-many | SL03G111160 SL11G007830 | 2 | ||
| Anchor point | N/A | SL11G007830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G007830 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-many | ST03G023920 ST11G010680 | 2 | |
| Tree-based ortholog | 1-to-many | ST03G023920 ST11G010680 | 2 | ||
| Anchor point | N/A | ST11G010680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G010680 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP5G10090 | 1 | |
| Tree-based ortholog | 1-to-1 | TP5G10090 | 1 | ||
| Anchor point | N/A | TP5G10090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G10090 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0010G08720 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0010G08720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G08720 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV00G11410 | 1 | |
| Tree-based ortholog | 1-to-1 | VV00G11410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G11410 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM01G00610 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM01G00610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G00610 | 1 |