Integrative Orthology Viewer: CRU_005G16590 (Capsella rubella)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Capsella rubella | Orthologous gene family | CRU_005G16590 | 1 | |
Tree-based ortholog | CRU_005G16590 | 1 | ||
Anchor point | CRU_003G30680 CRU_007G04070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | CRU_005G16590 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00001G01010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00001G01010 | 1 | ||
Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL5G20970 | 1 | |
Anchor point | many-to-many | AL3G38560 AL7G04880 AL5G20970 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G20970 | 1 | ||
Arabidopsis thaliana | Tree-based ortholog | 1-to-1 | AT3G51340 | 1 | |
Anchor point | many-to-many | AT2G17760 AT4G35880 AT3G51330 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G51340 | 1 | ||
Beta vulgaris | Tree-based ortholog | 1-to-many | BV6G08850 BV6G08840 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G08830 | 1 | ||
Brassica rapa | Tree-based ortholog | 1-to-1 | BR09G32990 | 1 | |
Anchor point | many-to-many | BR03G41970 BR01G02560 BR09G32990 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G32990 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-1 | CP00006G02990 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00006G02990 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G11180 | 1 | |
Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL10G01660 | 1 | |
Anchor point | many-to-many | CL01G20720 CL10G01660 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G01660 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00017G01680 | 1 | |
Anchor point | many-to-1 | CS00017G01680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00017G01680 | 1 | ||
Cucumis melo | Tree-based ortholog | 1-to-1 | CM00021G00530 | 1 | |
Anchor point | many-to-many | CM00007G09710 CM00021G00530 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00021G00530 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0010G21550 EG0009G19450 | 2 | |
Anchor point | many-to-1 | EG0010G21550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G21550 | 1 | ||
Fragaria vesca | Tree-based ortholog | 1-to-1 | FV1G13040 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G13040 | 1 | ||
Glycine max | Tree-based ortholog | 1-to-many | GM16G23140 GM02G05060 GM11G08530 ... | 4 | |
Anchor point | many-to-many | GM11G08530 GM02G05050 GM01G36770 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G08530 GM01G36770 | 2 | ||
Gossypium raimondii | Tree-based ortholog | 1-to-many | GR07G19140 GR03G00650 | 2 | |
Anchor point | many-to-many | GR03G00640 GR07G19120 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G19140 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-many | LJ1G010530 LJ2G028970 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G028970 | 1 | ||
Malus domestica | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD03G010360 MD11G011970 | 2 | |
Manihot esculenta | Tree-based ortholog | 1-to-1 | ME06512G01520 | 1 | |
Anchor point | many-to-1 | ME06512G01520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06512G01520 | 1 | ||
Medicago truncatula | Tree-based ortholog | 1-to-many | MT8G075090 MT5G022880 | 2 | |
Anchor point | many-to-1 | MT8G075010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G075090 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS04G15790 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G15790 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL17G01210 | 1 | |
Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00006G00100 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00006G00100 | 1 | ||
Populus trichocarpa | Tree-based ortholog | 1-to-1 | PT05G10870 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT07G06380 | 1 | ||
Prunus persica | Tree-based ortholog | 1-to-1 | PPE_007G19450 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G19450 | 1 | ||
Ricinus communis | Tree-based ortholog | 1-to-1 | RC28693G00020 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28693G00020 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL03G033360 SL02G083460 | 2 | |
Anchor point | many-to-many | SL03G033360 SL02G083450 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G083460 | 1 | ||
Solanum tuberosum | Tree-based ortholog | 1-to-many | ST03G009000 ST02G026750 | 2 | |
Anchor point | many-to-many | ST02G026740 ST03G009000 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G026750 | 1 | ||
Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP5G10890 | 1 | |
Anchor point | many-to-many | TP7G33660 TP5G10870 TP3G31170 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G10890 | 1 | ||
Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0001G01200 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G01200 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-1 | VV00G18890 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G18890 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-1 | ZM02G18870 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G18870 | 1 |