Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CRU_003G18380
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_003G18380 | 1 |  |
| Tree-based ortholog | CRU_003G18380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_003G18380 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00015G00080 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00015G00080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00015G00080 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL3G21000 | 1 | |
| Tree-based ortholog | 1-to-1 | AL3G21000 | 1 | ||
| Anchor point | N/A | AL3G21000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G21000 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G19440 | 1 | |
| Tree-based ortholog | 1-to-1 | AT3G19440 | 1 | ||
| Anchor point | N/A | AT3G19440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G19440 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV9G19630 | 1 | |
| Tree-based ortholog | 1-to-1 | BV9G19630 | 1 | ||
| Anchor point | N/A | BV9G19630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G19630 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR05G24170 | 1 | |
| Tree-based ortholog | 1-to-1 | BR05G24170 | 1 | ||
| Anchor point | N/A | BR05G24170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G24170 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00106G00870 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00106G00870 | 1 | ||
| Anchor point | N/A | CP00106G00870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00106G00870 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR10G02400 | 1 | |
| Tree-based ortholog | 1-to-1 | CR10G02400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR10G02400 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL02G06450 | 1 | |
| Tree-based ortholog | 1-to-1 | CL02G06450 | 1 | ||
| Anchor point | N/A | CL02G06450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G06450 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00065G00750 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00431G00040 | 1 | ||
| Anchor point | N/A | CS00065G00750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00065G00750 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00034G00960 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00034G00960 | 1 | ||
| Anchor point | N/A | CM00034G00960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00034G00960 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-many | EG0007G09850 EG0008G25960 | 2 | |
| Tree-based ortholog | 1-to-many | EG0008G25960 EG0007G09850 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0007G09850 EG0008G25960 | 2 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV6G38950 | 1 | |
| Tree-based ortholog | 1-to-1 | FV6G38950 | 1 | ||
| Anchor point | N/A | FV6G38950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G38950 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-1 | GM01G45530 | 1 | |
| Tree-based ortholog | 1-to-1 | GM01G45530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM01G45530 | 1 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR02G00950 | 1 | |
| Tree-based ortholog | 1-to-1 | GR02G00950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G00950 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ1G000270 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ1G000270 | 1 | ||
| Anchor point | N/A | LJ1G000260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G000270 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD00G075960 | 1 | |
| Tree-based ortholog | 1-to-1 | MD00G075960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G075960 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME07434G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | ME07434G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07434G00010 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT5G004910 | 1 | |
| Tree-based ortholog | 1-to-1 | MT5G004910 | 1 | ||
| Anchor point | N/A | MT5G004910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G004910 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS09G01620 | 1 | |
| Tree-based ortholog | 1-to-1 | OS09G01620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G01620 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | 1-to-1 | OL16G00800 | 1 | |
| Tree-based ortholog | 1-to-1 | OL16G00800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL16G00800 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00038G00280 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00038G00280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00038G00280 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT09G09570 | 1 | |
| Tree-based ortholog | 1-to-1 | PT09G09570 | 1 | ||
| Anchor point | N/A | PT09G09570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT09G09570 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_008G15400 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_008G15400 | 1 | ||
| Anchor point | N/A | PPE_008G15400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G15400 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29801G00370 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29801G00370 | 1 | ||
| Anchor point | N/A | RC29801G00370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29801G00370 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL01G107580 | 1 | |
| Tree-based ortholog | 1-to-1 | SL01G107580 | 1 | ||
| Anchor point | N/A | SL01G107580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G107580 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST01G044700 | 1 | |
| Tree-based ortholog | 1-to-1 | ST01G044700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G044700 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP3G17500 | 1 | |
| Tree-based ortholog | 1-to-1 | TP3G17500 | 1 | ||
| Anchor point | N/A | TP3G17500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G17500 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0002G10430 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0002G10430 | 1 | ||
| Anchor point | N/A | TC0002G10430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G10430 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV03G00440 | 1 | |
| Tree-based ortholog | 1-to-1 | VV03G00440 | 1 | ||
| Anchor point | N/A | VV03G00440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV03G00440 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM07G08800 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM07G08800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM07G08800 | 1 |