Integrative Orthology Viewer: CRU_002G24010 (Capsella rubella)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Capsella rubella | Orthologous gene family | CRU_001G15970 CRU_002G24010 CRU_007G12520 | 3 | |
Tree-based ortholog | CRU_002G24010 | 1 | ||
Anchor point | CRU_001G15970 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | CRU_002G24010 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00068G01020 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00068G01020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00068G01020 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G17850 AL2G27590 AL7G14420 | 3 | |
Tree-based ortholog | 1-to-1 | AL2G27590 | 1 | ||
Anchor point | 1-to-many | AL1G17850 AL2G27590 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G27590 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G16980 AT1G17000 AT1G78580 ... | 4 | |
Tree-based ortholog | 1-to-1 | AT1G78580 | 1 | ||
Anchor point | 1-to-many | AT1G16980 AT1G78580 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G78580 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G57040 | 1 | |
Tree-based ortholog | 1-to-1 | BV0G57040 | 1 | ||
Anchor point | 1-to-1 | BV0G57040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G57040 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G24850 BR03G49750 BR06G12050 ... | 5 | |
Tree-based ortholog | 1-to-many | BR02G24850 BR07G33310 | 2 | ||
Anchor point | 1-to-many | BR02G24850 BR06G12050 BR07G33310 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G33310 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00017G01500 CP00017G01510 CP00077G00670 | 3 | |
Tree-based ortholog | 1-to-1 | CP00017G01510 | 1 | ||
Anchor point | 1-to-1 | CP00077G00670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00077G00670 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR16G04480 CR16G07990 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR16G07990 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL03G07030 CL11G11230 | 2 | |
Tree-based ortholog | 1-to-1 | CL11G11230 | 1 | ||
Anchor point | 1-to-1 | CL11G11230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G11230 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00007G01680 CS00243G00050 | 2 | |
Tree-based ortholog | 1-to-1 | CS00243G00050 | 1 | ||
Anchor point | 1-to-1 | CS00243G00050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00243G00050 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00001G08170 CM00081G00890 | 2 | |
Tree-based ortholog | 1-to-1 | CM00081G00890 | 1 | ||
Anchor point | 1-to-1 | CM00081G00890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00081G00890 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0006G27350 | 1 | |
Tree-based ortholog | 1-to-1 | EG0006G27350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G27350 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV3G08450 FV3G19550 | 2 | |
Tree-based ortholog | 1-to-1 | FV3G19550 | 1 | ||
Anchor point | 1-to-1 | FV3G19550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G19550 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM05G29651 GM08G12760 GM12G36280 ... | 5 | |
Tree-based ortholog | 1-to-many | GM15G27480 GM12G36280 GM13G33970 | 3 | ||
Anchor point | 1-to-many | GM12G36280 GM13G33970 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM15G27480 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G04640 GR06G09450 GR06G09470 ... | 5 | |
Tree-based ortholog | 1-to-many | GR09G36260 GR02G04640 | 2 | ||
Anchor point | 1-to-many | GR09G36260 GR02G04640 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G04640 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ4G042430 | 1 | |
Tree-based ortholog | 1-to-1 | LJ4G042430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G042430 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G033800 MD00G511740 MD03G021260 | 3 | |
Tree-based ortholog | 1-to-many | MD00G033800 MD00G152070 MD03G021260 | 3 | ||
Anchor point | 1-to-1 | MD03G021260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD03G021260 MD00G033800 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02831G00060 ME03542G00060 ME06582G00510 ... | 4 | |
Tree-based ortholog | 1-to-many | ME02831G00060 ME03542G00060 | 2 | ||
Anchor point | 1-to-1 | ME03542G00060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME03542G00060 ME02831G00060 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT00G12290 MT2G073260 MT8G087910 | 3 | |
Tree-based ortholog | 1-to-many | MT00G12290 MT2G073260 | 2 | ||
Anchor point | 1-to-1 | MT2G073260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT00G12290 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS05G44210 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G44210 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL01G02420 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G02420 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00116G00820 PP00240G00530 | 2 | |
Tree-based ortholog | 1-to-many | PP00240G00530 PP00116G00820 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00116G00820 PP00240G00530 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G38360 PT04G06460 PT11G10390 | 3 | |
Tree-based ortholog | 1-to-many | PT01G38360 PT11G10390 | 2 | ||
Anchor point | 1-to-many | PT11G10390 PT01G38360 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT11G10390 PT01G38360 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_004G06790 PPE_004G14870 | 2 | |
Tree-based ortholog | 1-to-1 | PPE_004G14870 | 1 | ||
Anchor point | 1-to-1 | PPE_004G14870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G14870 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29607G00010 RC30026G00740 | 2 | |
Tree-based ortholog | 1-to-1 | RC29607G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29607G00010 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G071590 SL07G062140 | 2 | |
Tree-based ortholog | 1-to-1 | SL07G062140 | 1 | ||
Anchor point | 1-to-1 | SL07G062140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G062140 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G018090 ST07G025170 | 2 | |
Tree-based ortholog | 1-to-1 | ST07G025170 | 1 | ||
Anchor point | 1-to-1 | ST07G025170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G025170 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP3G28650 TP5G33670 TP7G25490 | 3 | |
Tree-based ortholog | 1-to-1 | TP5G33670 | 1 | ||
Anchor point | 1-to-1 | TP5G33670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G33670 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0006G15760 TC0007G12470 | 2 | |
Tree-based ortholog | 1-to-1 | TC0007G12470 | 1 | ||
Anchor point | 1-to-1 | TC0007G12470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0007G12470 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV19G00980 | 1 | |
Tree-based ortholog | 1-to-1 | VV19G00980 | 1 | ||
Anchor point | 1-to-many | VV19G00980 VV12G03240 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV19G00980 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM06G28700 | 1 | |
Tree-based ortholog | 1-to-many | ZM08G19270 ZM06G28710 ZM06G28700 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G19270 | 1 |