Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CP00128G00540
(Carica papaya)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Carica papaya | Orthologous gene family | CP00128G00540 | 1 |  |
| Tree-based ortholog | CP00128G00540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CP00128G00540 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00130G00710 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00130G00710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00130G00710 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL2G04980 | 1 | |
| Tree-based ortholog | 1-to-1 | AL2G04980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G04980 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT1G60970 | 1 | |
| Tree-based ortholog | 1-to-1 | AT1G60970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G60970 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV7G03260 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G03260 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR09G14220 | 1 | |
| Tree-based ortholog | 1-to-1 | BR09G14220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G14220 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_002G04080 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_002G04080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G04080 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR08G03660 | 1 | |
| Tree-based ortholog | 1-to-1 | CR08G03660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR08G03660 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL03G06870 | 1 | |
| Tree-based ortholog | 1-to-1 | CL03G06870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G06870 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00007G01990 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00007G01990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00007G01990 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00001G08350 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00001G08350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00001G08350 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0005G18220 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0005G18220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G18220 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV3G08810 | 1 | |
| Tree-based ortholog | 1-to-1 | FV3G08810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G08810 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM09G02270 GM15G13190 | 2 | |
| Tree-based ortholog | 1-to-many | GM09G02270 GM15G13190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM09G02270 GM15G13190 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR04G17780 GR06G09380 | 2 | |
| Tree-based ortholog | 1-to-1 | GR04G17780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G17780 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ6G020530 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ6G020530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G020530 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD10G021220 | 1 | |
| Tree-based ortholog | 1-to-many | MD10G021220 MD05G006560 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD13G025630 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME06582G00250 ME09120G00110 | 2 | |
| Tree-based ortholog | 1-to-many | ME09120G00110 ME06582G00250 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME09120G00110 ME06582G00250 | 2 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT2G028750 | 1 | |
| Tree-based ortholog | 1-to-1 | MT2G028750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G028750 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS02G21250 | 1 | |
| Tree-based ortholog | 1-to-1 | OS02G21250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G21250 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL02G03990 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL02G03990 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-many | PP00008G00540 PP00013G00940 PP00056G01120 | 3 | |
| Tree-based ortholog | 1-to-many | PP00056G01120 PP00013G00940 PP00073G00750 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00008G00540 PP00013G00940 PP00056G01120 | 3 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-1 | PT01G35290 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G19720 PT03G04320 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_004G07140 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_004G07140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G07140 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC29706G00640 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29706G00640 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-many | SL02G071170 SL12G044910 | 2 | |
| Tree-based ortholog | 1-to-1 | SL02G071170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G071170 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-many | ST02G017510 ST12G022770 | 2 | |
| Tree-based ortholog | 1-to-1 | ST02G017510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G035140 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP2G03610 | 1 | |
| Tree-based ortholog | 1-to-1 | TP2G03610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G03610 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-many | TC0003G31370 TC0006G15390 | 2 | |
| Tree-based ortholog | 1-to-1 | TC0003G31370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G31370 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV10G03510 | 1 | |
| Tree-based ortholog | 1-to-1 | VV10G03510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV10G03510 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM07G16710 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM07G16710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM07G16710 | 1 |