Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CP00084G01050
(Carica papaya)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Carica papaya | Orthologous gene family | CP00084G01050 | 1 |  |
| Tree-based ortholog | CP00084G01050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CP00084G01050 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00022G02570 | 1 | |
| Tree-based ortholog | 1-to-many | ATR_00011G01650 ATR_00011G01640 ATR_00022G02570 | 3 | ||
| Anchor point | N/A | ATR_00022G02570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00022G02570 | 1 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G21620 | 1 | |
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G20480 | 1 | |
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G62840 | 1 | |
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR08G25140 BR06G14780 | 2 | |
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G19130 | 1 | |
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G11880 | 1 | |
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL02G23610 | 1 | |
| Tree-based ortholog | 1-to-1 | CL02G23610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G23610 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00033G00930 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00033G00930 | 1 | ||
| Anchor point | N/A | CS00033G00930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00033G00930 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00022G04730 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00022G04720 | 1 | ||
| Anchor point | N/A | CM00022G04720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00022G04720 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-many | EG0010G07100 EG0010G07110 EG0010G07150 | 3 | |
| Tree-based ortholog | 1-to-many | EG0010G07110 EG0010G07100 EG0010G07150 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0010G07100 EG0010G07150 EG0010G07110 | 3 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV3G42850 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G42850 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM13G41761 GM15G03641 | 2 | |
| Tree-based ortholog | 1-to-many | GM11G13901 GM12G05856 GM15G03641 ... | 4 | ||
| Anchor point | N/A | GM15G03641 GM13G41761 GM12G05856 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM12G05856 | 1 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR09G07130 | 1 | |
| Tree-based ortholog | 1-to-1 | GR09G07130 | 1 | ||
| Anchor point | N/A | GR09G07130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G07130 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G029740 | 1 | |
| Malus domestica | Orthologous gene family | 1-to-1 | MD00G325410 | 1 | |
| Tree-based ortholog | 1-to-many | MD00G336410 MD00G325330 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G336410 MD00G325330 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME04681G00170 | 1 | |
| Tree-based ortholog | 1-to-1 | ME04681G00170 | 1 | ||
| Anchor point | N/A | ME04681G00170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04681G00170 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-many | MT2G098490 MT4G066130 | 2 | |
| Tree-based ortholog | 1-to-many | MT4G066130 MT2G098490 | 2 | ||
| Anchor point | N/A | MT2G098490 MT4G066130 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G098490 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS04G39780 | 1 | |
| Tree-based ortholog | 1-to-1 | OS04G39780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G39780 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL07G01910 | 1 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00006G01160 PP00052G00450 PP00012G00270 | 3 | |
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT03G21060 PT03G21070 | 2 | |
| Anchor point | N/A | PT03G21060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT03G21070 PT03G21060 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_006G05460 | 1 | |
| Anchor point | N/A | PPE_006G05460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G05460 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30169G01630 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30169G01630 | 1 | ||
| Anchor point | N/A | RC30169G01630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30169G01630 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL01G006640 | 1 | |
| Tree-based ortholog | 1-to-1 | SL01G006640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G006640 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST01G007180 | 1 | |
| Tree-based ortholog | 1-to-1 | ST01G007180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G007180 | 1 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G18190 | 1 | |
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0009G22060 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0009G22060 | 1 | ||
| Anchor point | N/A | TC0009G22060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G22060 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV06G06570 | 1 | |
| Tree-based ortholog | 1-to-1 | VV06G06570 | 1 | ||
| Anchor point | N/A | VV06G06570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G06570 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM02G12490 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM02G12490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G12490 | 1 |