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Integrative Orthology Viewer:
BR09G43380
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR03G24180 BR09G43380 | 2 |  |
| Tree-based ortholog | BR09G43380 BR03G24180 | 2 | ||
| Anchor point | BR03G51980 BR01G06680 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR03G24180 BR09G43380 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | many-to-1 | ATR_00019G00600 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00019G00600 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL4G04050 | 1 | |
| Tree-based ortholog | many-to-1 | AL4G04050 | 1 | ||
| Anchor point | many-to-many | AL4G04050 AL7G10720 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL4G04050 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT2G24150 | 1 | |
| Tree-based ortholog | many-to-1 | AT2G24150 | 1 | ||
| Anchor point | many-to-many | AT2G24150 AT4G30850 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G24150 | 1 | ||
| Beta vulgaris | Tree-based ortholog | many-to-1 | BV8G15450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV8G15450 | 1 | ||
| Capsella rubella | Tree-based ortholog | many-to-1 | CRU_004G03240 | 1 | |
| Anchor point | many-to-many | CRU_007G09210 CRU_004G03240 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_004G03240 | 1 | ||
| Carica papaya | Tree-based ortholog | many-to-1 | CP00199G00120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00199G00120 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR06G14190 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR06G14190 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | many-to-1 | CL06G13220 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL06G13220 | 1 | ||
| Citrus sinensis | Tree-based ortholog | many-to-1 | CS00048G00260 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00048G00260 | 1 | ||
| Cucumis melo | Tree-based ortholog | many-to-1 | CM00012G02100 | 1 | |
| Anchor point | many-to-1 | CM00012G02100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00012G02100 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | many-to-many | EG0003G19840 EG0259G00050 | 2 | |
| Anchor point | many-to-1 | EG0003G19840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | EG0259G00050 EG0003G19840 | 2 | ||
| Fragaria vesca | Tree-based ortholog | many-to-many | FV6G43130 FV4G02450 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV4G02450 | 1 | ||
| Glycine max | Tree-based ortholog | many-to-many | GM17G07870 GM02G36870 GM06G30010 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM02G36870 GM17G07870 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | many-to-1 | GR04G10640 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR04G10640 | 1 | ||
| Lotus japonicus | Tree-based ortholog | many-to-1 | LJ6G012330 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ6G012330 | 1 | ||
| Malus domestica | Tree-based ortholog | many-to-many | MD15G036530 MD00G364810 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD08G023110 | 1 | ||
| Manihot esculenta | Tree-based ortholog | many-to-1 | ME09209G00040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME09209G00040 | 1 | ||
| Medicago truncatula | Tree-based ortholog | many-to-many | MT00G31790 MT00G31780 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT4G115580 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS06G44250 | 1 | |
| Tree-based ortholog | many-to-many | OS02G08320 OS06G44250 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS06G44250 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | many-to-1 | OL20G01630 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL20G01630 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | many-to-many | PP00248G00380 PP00029G01450 PP00171G00730 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00248G00380 PP00029G01450 | 2 | ||
| Populus trichocarpa | Tree-based ortholog | many-to-1 | PT18G10240 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT18G10240 | 1 | ||
| Prunus persica | Tree-based ortholog | many-to-1 | PPE_001G09590 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_007G26670 | 1 | ||
| Ricinus communis | Tree-based ortholog | many-to-1 | RC30114G00060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30114G00060 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL07G006020 | 1 | |
| Tree-based ortholog | many-to-many | SL07G006020 SL12G010480 | 2 | ||
| Anchor point | many-to-1 | SL07G006020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL07G006020 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST07G005900 | 1 | |
| Tree-based ortholog | many-to-many | ST07G005900 ST12G007380 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST07G005900 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP7G28730 | 1 | |
| Tree-based ortholog | many-to-1 | TP4G03100 | 1 | ||
| Anchor point | many-to-many | TP7G28730 TP4G03100 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP4G03100 | 1 | ||
| Theobroma cacao | Tree-based ortholog | many-to-1 | TC0009G14890 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0009G14890 | 1 | ||
| Vitis vinifera | Tree-based ortholog | many-to-1 | VV11G07780 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV11G01140 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM05G21160 ZM09G16140 | 2 | |
| Tree-based ortholog | many-to-many | ZM04G38730 ZM05G21160 ZM09G16140 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM05G21160 | 1 |