Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
BR09G43130
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR09G43130 | 1 |  |
| Tree-based ortholog | BR09G43140 BR04G13990 BR04G14050 ... | 5 | ||
| Anchor point | BR04G13990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR09G43130 BR09G43140 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00119G00660 | 1 | |
| Arabidopsis lyrata | Tree-based ortholog | many-to-many | AL4G05300 AL4G05490 AL4G08260 ... | 4 | |
| Anchor point | 1-to-1 | AL4G04710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | AL4G05300 AL4G05490 AL4G08260 | 3 | ||
| Arabidopsis thaliana | Tree-based ortholog | many-to-1 | AT3G42940 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT5G43200 AT3G28620 | 2 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV9G09930 | 1 | |
| Capsella rubella | Tree-based ortholog | many-to-1 | CRU_004G04080 | 1 | |
| Anchor point | 1-to-1 | CRU_004G03740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_004G04080 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP33616G00010 | 1 | |
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR12G05330 | 1 | |
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL07G00970 | 1 | |
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00123G00400 | 1 | |
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00034G03370 | 1 | |
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | many-to-many | EG0001G16080 EG0001G16050 | 2 | |
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-many | FV1G24290 FV4G06220 FV1G24280 ... | 4 | |
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM05G37620 GM08G01960 | 2 | |
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR12G13490 | 1 | |
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ3G018490 | 1 | |
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD17G020440 MD09G022850 MD00G198160 | 3 | |
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME11689G00030 | 1 | |
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT3G083480 | 1 | |
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS05G40980 | 1 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00223G00770 PP00037G00500 PP00161G00410 | 3 | |
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT01G00150 PT03G22320 | 2 | |
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_006G01720 | 1 | |
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29983G01720 | 1 | |
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL08G081300 | 1 | |
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST12G012900 | 1 | |
| Thellungiella parvula | Tree-based ortholog | many-to-1 | TP4G03480 | 1 | |
| Anchor point | 1-to-1 | TP4G03480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP4G03480 | 1 | ||
| Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0002G20940 | 1 | |
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV12G03320 | 1 | |
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM08G33360 ZM03G29350 | 2 | |